RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 NSMCE2Q96MF7 247 aa8.62□□□□□ -1.03
TVP23B-208ENST00000575261 KCNJ15Q99712 375 aa8.62□□□□□ -1.03
TVP23B-208ENST00000575261 RBM4BQ9BQ04 359 aaKnown RBP8.62□□□□□ -1.03
TVP23B-208ENST00000575261 RASSF4Q9H2L5 321 aa8.62□□□□□ -1.03
TVP23B-208ENST00000575261 EGLN3Q9H6Z9 239 aa8.62□□□□□ -1.03
TVP23B-208ENST00000575261 CENPMQ9NSP4 180 aa8.62□□□□□ -1.03
TVP23B-208ENST00000575261 CD300AQ9UGN4 299 aa8.62□□□□□ -1.03
TVP23B-208ENST00000575261 CAB39Q9Y376 341 aaPredicted RBP8.62□□□□□ -1.03
TVP23B-208ENST00000575261 FAM96BQ9Y3D0 163 aa8.62□□□□□ -1.03
TVP23B-208ENST00000575261 BTBD17A6NE02 478 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 GPR37O15354 613 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 FCN3O75636 299 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 TIPRLO75663 272 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 FBP1P09467 338 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 PSKH1P11801 424 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 HSD17B1P14061 328 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 MUC1P15941 1255 aaPredicted RBP8.61□□□□□ -1.03
TVP23B-208ENST00000575261 PRDX6P30041 224 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 FMO3P31513 532 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 PROK1P58294 105 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 KRTAP10-3P60369 221 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 GRB2P62993 217 aaKnown RBP8.61□□□□□ -1.03
TVP23B-208ENST00000575261 TAF9Q16594 264 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 TIGD6Q17RP2 521 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 HSP90B2PQ58FF3 399 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 WDR38Q5JTN6 314 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 DHRS7BQ6IAN0 325 aaPredicted RBP8.61□□□□□ -1.03
TVP23B-208ENST00000575261 ASPHD2Q6ICH7 369 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 SLC36A1Q7Z2H8 476 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 PDZD9Q8IXQ8 264 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 CMTM4Q8IZR5 234 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 OR51L1Q8NGJ5 315 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 OR9Q1Q8NGQ5 310 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 LRRC29Q8WV35 223 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 SPSB4Q96A44 273 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 DMRTB1Q96MA1 342 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 DDOQ99489 341 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 PKP2Q99959 881 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 MYLK2Q9H1R3 596 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 CNTD2Q9H8S5 307 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 RNPEPL1Q9HAU8 725 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 TCF7L1Q9HCS4 588 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 IL1RAPQ9NPH3 570 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 TBC1D23Q9NUY8 699 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 ZNRD1Q9P1U0 126 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 ONECUT1Q9UBC0 465 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 N6AMT1Q9Y5N5 214 aa8.61□□□□□ -1.03
TVP23B-208ENST00000575261 SLC22A31A6NKX4 558 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 ARPC2O15144 300 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 TBX1O43435 398 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 KRT36O76013 467 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 ANXA2P07355 339 aaKnown RBP8.6□□□□□ -1.03
TVP23B-208ENST00000575261 CFL1P23528 166 aaKnown RBP8.6□□□□□ -1.03
TVP23B-208ENST00000575261 HSD11B1P28845 292 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 SLC15A1P46059 708 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 CX3CR1P49238 355 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 FAM3AP98173 230 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 GUCA2AQ02747 115 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 POU4F2Q12837 409 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 CRMP1Q14194 572 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 C2orf68Q2NKX9 166 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 TEX30Q5JUR7 227 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 SAMD4BQ5PRF9 694 aaKnown RBP8.6□□□□□ -1.03
TVP23B-208ENST00000575261 METAP1DQ6UB28 335 aaPredicted RBP8.6□□□□□ -1.03
TVP23B-208ENST00000575261 WDR82Q6UXN9 313 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 Q6ZSV7 163 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 SLC16A9Q7RTY1 509 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 DPY19L4Q7Z388 723 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 WDR86Q86TI4 376 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 FTMTQ8N4E7 242 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 LINC00471Q8N535 108 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 ZSCAN4Q8NAM6 433 aaPredicted RBP8.6□□□□□ -1.03
TVP23B-208ENST00000575261 SLC37A3Q8NCC5 494 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 LY6G5BQ8NDX9 201 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 OR1M1Q8NGA1 313 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 OR9Q2Q8NGE9 314 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 OR6K6Q8NGW6 343 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 NPRL2Q8WTW4 380 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 ZNRF4Q8WWF5 429 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 C12orf43Q96C57 262 aaKnown RBP8.6□□□□□ -1.03
TVP23B-208ENST00000575261 REEP6Q96HR9 211 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 CCL13Q99616 98 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 BTBD10Q9BSF8 475 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 TOR3AQ9H497 397 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 SP140LQ9H930 580 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 IL20Q9NYY1 176 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 VPREB3Q9UKI3 123 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 LYVE1Q9Y5Y7 322 aa8.6□□□□□ -1.03
TVP23B-208ENST00000575261 hCG_38984A0A1B0GV85 526 aa8.59□□□□□ -1.03
TVP23B-208ENST00000575261 A0A1B0GW55 424 aa8.59□□□□□ -1.03
TVP23B-208ENST00000575261 DHRS12A0PJE2 317 aa8.59□□□□□ -1.03
TVP23B-208ENST00000575261 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.59□□□□□ -1.03
TVP23B-208ENST00000575261 ZNF593O00488 134 aaPredicted RBP8.59□□□□□ -1.03
TVP23B-208ENST00000575261 NDUFB3O43676 98 aa8.59□□□□□ -1.03
TVP23B-208ENST00000575261 TSPAN15O95858 294 aa8.59□□□□□ -1.03
TVP23B-208ENST00000575261 IFNGP01579 166 aa8.59□□□□□ -1.03
TVP23B-208ENST00000575261 APOC1P02654 83 aa8.59□□□□□ -1.03
TVP23B-208ENST00000575261 GYPBP06028 91 aa8.59□□□□□ -1.03
TVP23B-208ENST00000575261 DUX4L2P0CJ85 424 aa8.59□□□□□ -1.03
TVP23B-208ENST00000575261 DUX4L3P0CJ86 424 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms