RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 FAM74A1Q5RGS3 127 aa7.89□□□□□ -1.15
NCBP3-204ENST00000574911 FAM57BQ71RH2 274 aa7.89□□□□□ -1.15
NCBP3-204ENST00000574911 ZNF283Q8N7M2 679 aa7.89□□□□□ -1.15
NCBP3-204ENST00000574911 CASTOR1Q8WTX7 329 aa7.89□□□□□ -1.15
NCBP3-204ENST00000574911 TMEM41AQ96HV5 264 aa7.89□□□□□ -1.15
NCBP3-204ENST00000574911 ZNF75AQ96N20 296 aa7.89□□□□□ -1.15
NCBP3-204ENST00000574911 OCSTAMPQ9BR26 566 aa7.89□□□□□ -1.15
NCBP3-204ENST00000574911 BANF2Q9H503 90 aa7.89□□□□□ -1.15
NCBP3-204ENST00000574911 AKIRIN1Q9H9L7 192 aaPredicted RBP7.89□□□□□ -1.15
NCBP3-204ENST00000574911 DUX4Q9UBX2 424 aa7.89□□□□□ -1.15
NCBP3-204ENST00000574911 GPR132Q9UNW8 380 aa7.89□□□□□ -1.15
NCBP3-204ENST00000574911 CACNA1CQ13936 2221 aa7.89□□□□□ -1.15
NCBP3-204ENST00000574911 CEACAM18A8MTB9 384 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 FAM25EA8MYX2 175 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 MFNGO00587 321 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 HCKP08631 526 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 PRF1P14222 555 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 VAMP1P23763 118 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 CXCL12P48061 93 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 LSM6P62312 80 aaKnown RBP7.88□□□□□ -1.15
NCBP3-204ENST00000574911 PCOLCEQ15113 449 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 TMPPEQ6ZT21 453 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 KCTD9Q7L273 389 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 PPP1R3BQ86XI6 285 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 ZBTB44Q8NCP5 570 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 OR10K1Q8NGX5 313 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 TERB2Q8NHR7 220 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 LHFPL5Q8TAF8 219 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 THAP6Q8TBB0 222 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 SAP25Q8TEE9 199 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 TMEM54Q969K7 222 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 TMEM59Q9BXS4 323 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 MS4A7Q9GZW8 240 aaPredicted RBP7.88□□□□□ -1.15
NCBP3-204ENST00000574911 ASXL3Q9C0F0 2248 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 A0A087WZY1 265 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 A0A1W2PP11 408 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 FOXI3A8MTJ6 420 aaPredicted RBP7.88□□□□□ -1.15
NCBP3-204ENST00000574911 TP53I11O14683 189 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 SIGLEC6O43699 453 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 CRHP06850 196 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 SERPINF1P36955 418 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 STARP49675 285 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 CLDN17P56750 224 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 H3F3AP84243 136 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 ATXN7L3Q14CW9 347 aaPredicted RBP7.88□□□□□ -1.15
NCBP3-204ENST00000574911 FAM189A2Q15884 450 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 CRIP3Q6Q6R5 217 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 FOXL2NBQ6ZUU3 175 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 FAM89BQ8N5H3 189 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 ARRDC1Q8N5I2 433 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 TMEM185AQ8NFB2 350 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 OR56B1Q8NGI3 324 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 TMEM230Q96A57 120 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 CYYR1Q96J86 154 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 ZC3H10Q96K80 434 aaKnown RBP7.88□□□□□ -1.15
NCBP3-204ENST00000574911 LYZL4Q96KX0 146 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 ZNF416Q9BWM5 594 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 ZNF471Q9BX82 626 aaPredicted RBP7.88□□□□□ -1.15
NCBP3-204ENST00000574911 NMES1Q9C002 83 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 GAREM1Q9H706 876 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 OCIAD1Q9NX40 245 aa7.88□□□□□ -1.15
NCBP3-204ENST00000574911 LOC102723996A0A087X1L8 192 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 TRBV6-7A0A0A0MS04 114 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 C5orf63A6NC05 138 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 EEF1E1-BLOC1S5C9J1V9 151 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 SEC16AO15027 2179 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 CEP290O15078 2479 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 TLX3O43711 291 aaPredicted RBP7.87□□□□□ -1.15
NCBP3-204ENST00000574911 CRTAPO75718 401 aaPredicted RBP7.87□□□□□ -1.15
NCBP3-204ENST00000574911 PSMB6P28072 239 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 ALDH3B1P43353 468 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 CBX5P45973 191 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 ZNF133P52736 654 aaPredicted RBP7.87□□□□□ -1.15
NCBP3-204ENST00000574911 SGCAQ16586 387 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 C10orf128Q5T292 105 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 PRAMEF20Q5VT98 475 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 GTPBP8Q8N3Z3 284 aaPredicted RBP7.87□□□□□ -1.15
NCBP3-204ENST00000574911 PHF3Q92576 2039 aaKnown RBP7.87□□□□□ -1.15
NCBP3-204ENST00000574911 PGAM5Q96HS1 289 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 ARHGAP5-AS1Q96IT6 56 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 ARPC5LQ9BPX5 153 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 URM1Q9BTM9 101 aaKnown RBP7.87□□□□□ -1.15
NCBP3-204ENST00000574911 C5orf66Q9H5L9 145 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 LDAHQ9H6V9 325 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.87□□□□□ -1.15
NCBP3-204ENST00000574911 MBD2Q9UBB5 411 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 V9GYS6 101 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 UNC13CQ8NB66 2214 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 A0A0B4J2A0 478 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 TRIM77I1YAP6 450 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 SFT2D2O95562 160 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 FGF5P12034 268 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 CNR1P21554 472 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 THBS4P35443 961 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 PPIAP62937 165 aaKnown RBP7.87□□□□□ -1.15
NCBP3-204ENST00000574911 HIST1H3AP68431 136 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 ECH1Q13011 328 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 ZNF273Q14593 569 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 GFOD2Q3B7J2 385 aa7.87□□□□□ -1.15
NCBP3-204ENST00000574911 PAN3Q58A45 887 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms