RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 MAPK1IP1LQ8NDC0 245 aa12.3□□□□□ -0.44
ABR-223ENST00000573895 OR13F1Q8NGS4 319 aa12.3□□□□□ -0.44
ABR-223ENST00000573895 AKR7LQ8NHP1 331 aa12.3□□□□□ -0.44
ABR-223ENST00000573895 UFD1Q92890 307 aa12.3□□□□□ -0.44
ABR-223ENST00000573895 POM121L2Q96KW2 1035 aa12.3□□□□□ -0.44
ABR-223ENST00000573895 OPALINQ96PE5 141 aa12.3□□□□□ -0.44
ABR-223ENST00000573895 PIMREGQ9BSJ6 248 aa12.3□□□□□ -0.44
ABR-223ENST00000573895 ACOXLQ9NUZ1 547 aa12.3□□□□□ -0.44
ABR-223ENST00000573895 GPR160Q9UJ42 338 aa12.3□□□□□ -0.44
ABR-223ENST00000573895 R4GMQ9 66 aa12.3□□□□□ -0.44
ABR-223ENST00000573895 ABCA2Q9BZC7 2435 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 TRBV2A0A0J9YWF9 115 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 E9PI62 339 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 LOC110117498-PIK3R3F6TDL0 507 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 CCRL2O00421 344 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 SRSF10O75494 262 aaKnown RBP12.29□□□□□ -0.44
ABR-223ENST00000573895 RPP14O95059 124 aaKnown RBP12.29□□□□□ -0.44
ABR-223ENST00000573895 CCL2P13500 99 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 DAOP14920 347 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 CELP19835 753 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 USF1P22415 310 aaPredicted RBP12.29□□□□□ -0.44
ABR-223ENST00000573895 GIFP27352 417 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 GDI2P50395 445 aaKnown RBP12.29□□□□□ -0.44
ABR-223ENST00000573895 PSMA6P60900 246 aaKnown RBP12.29□□□□□ -0.44
ABR-223ENST00000573895 ALKBH1Q13686 389 aaKnown RBP12.29□□□□□ -0.44
ABR-223ENST00000573895 TRAM1Q15629 374 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 MOGQ16653 247 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 RSPO1Q2MKA7 263 aaPredicted RBP12.29□□□□□ -0.44
ABR-223ENST00000573895 ARL9Q6T311 187 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 MS4A15Q8N5U1 240 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 ZNF283Q8N7M2 679 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 OR2G2Q8NGZ5 317 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 SYNPRQ8TBG9 265 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 RPS4Y2Q8TD47 263 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 RNF166Q96A37 237 aaPredicted RBP12.29□□□□□ -0.44
ABR-223ENST00000573895 MOB1AQ9H8S9 216 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 EIF3KQ9UBQ5 218 aaKnown RBP12.29□□□□□ -0.44
ABR-223ENST00000573895 MALRD1Q5VYJ5 2156 aa12.29□□□□□ -0.44
ABR-223ENST00000573895 LOC100509620A0A075B734 347 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 TMEM212A6NML5 194 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 F5H5K5 113 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 H3BSA7 217 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 M0R135 149 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 LALBAP00709 142 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 ACSM4P0C7M7 580 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 FAM157BP0CG42 384 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 GALP22466 123 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 PSMA1P25786 263 aaKnown RBP12.28□□□□□ -0.44
ABR-223ENST00000573895 PSMB10P40306 273 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 NR4A2P43354 598 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 PRKXP51817 358 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 GTF2A1P52655 376 aaPredicted RBP12.28□□□□□ -0.44
ABR-223ENST00000573895 KLF3P57682 345 aaPredicted RBP12.28□□□□□ -0.44
ABR-223ENST00000573895 MRPS11P82912 194 aaKnown RBP12.28□□□□□ -0.44
ABR-223ENST00000573895 CDK5R1Q15078 307 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 TSTQ16762 297 aaKnown RBP12.28□□□□□ -0.44
ABR-223ENST00000573895 TMEM249Q2WGJ8 235 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 LRP11Q86VZ4 500 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 CATSPERDQ86XM0 798 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 PHC2Q8IXK0 858 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 ZCCHC24Q8N2G6 241 aaKnown RBP12.28□□□□□ -0.44
ABR-223ENST00000573895 OR52H1Q8NGJ2 320 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 UBASH3BQ8TF42 649 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 ITFG2Q969R8 447 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 TMIGD2Q96BF3 282 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 ZNF799Q96GE5 643 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 SYT3Q9BQG1 590 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 FRRS1LQ9P0K9 344 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 DUSP13Q9UII6 198 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 OR52A1Q9UKL2 312 aa12.28□□□□□ -0.44
ABR-223ENST00000573895 ANK3Q12955 4377 aaKnown RBP12.28□□□□□ -0.44
ABR-223ENST00000573895 C5orf49A4QMS7 147 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 J3QW42 95 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 PNPP00491 289 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 IGHV3-13P01766 116 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 CD36P16671 472 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 TUBG1P23258 451 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 GABRA5P31644 462 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 LIPAP38571 399 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 CX3CR1P49238 355 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 ZNF121P58317 390 aaPredicted RBP12.27□□□□□ -0.45
ABR-223ENST00000573895 TIMM50Q3ZCQ8 353 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 LIPKQ5VXJ0 399 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 ELMOD2Q8IZ81 293 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 OR5AK2Q8NH90 309 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 GHSRQ92847 366 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 SMIM19Q96E16 107 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 YIPF6Q96EC8 236 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 C4orf45Q96LM5 186 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 COMMD4Q9H0A8 199 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 TUBG2Q9NRH3 451 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 NDUFB11Q9NX14 153 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 FAM206AQ9NX38 181 aa12.27□□□□□ -0.45
ABR-223ENST00000573895 MYEF2Q9P2K5 600 aaKnown RBP12.27□□□□□ -0.45
ABR-223ENST00000573895 NUFIP1Q9UHK0 495 aaKnown RBP12.27□□□□□ -0.45
ABR-223ENST00000573895 SIRT4Q9Y6E7 314 aaPredicted RBP12.27□□□□□ -0.45
ABR-223ENST00000573895 SMIM31A0A1B0GVY4 71 aa12.26□□□□□ -0.45
ABR-223ENST00000573895 A0A1W2PPW3 197 aa12.26□□□□□ -0.45
ABR-223ENST00000573895 OR4C45A6NMZ5 311 aa12.26□□□□□ -0.45
ABR-223ENST00000573895 INAFM1C9JVW0 142 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms