RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 IFNL4K9M1U5 179 aa23.3■■□□□ 1.32
SCARF1-207ENST00000573867 FAM20BO75063 409 aa23.3■■□□□ 1.32
SCARF1-207ENST00000573867 FAM157CP0CG43 387 aa23.3■■□□□ 1.32
SCARF1-207ENST00000573867 MFGE8Q08431 387 aaPredicted RBP23.3■■□□□ 1.32
SCARF1-207ENST00000573867 OR8B8Q15620 311 aa23.3■■□□□ 1.32
SCARF1-207ENST00000573867 TMEM155Q4W5P6 130 aa23.3■■□□□ 1.32
SCARF1-207ENST00000573867 ZNF322Q6U7Q0 402 aaPredicted RBP23.3■■□□□ 1.32
SCARF1-207ENST00000573867 Q8TCH9 128 aa23.3■■□□□ 1.32
SCARF1-207ENST00000573867 PPP1R14AQ96A00 147 aa23.3■■□□□ 1.32
SCARF1-207ENST00000573867 WARS2Q9UGM6 360 aaKnown RBP23.3■■□□□ 1.32
SCARF1-207ENST00000573867 RHBDD3Q9Y3P4 386 aa23.3■■□□□ 1.32
SCARF1-207ENST00000573867 ORC6Q9Y5N6 252 aa23.3■■□□□ 1.32
SCARF1-207ENST00000573867 MXRA5Q9NR99 2828 aa23.29■■□□□ 1.32
SCARF1-207ENST00000573867 SRSF10O75494 262 aaKnown RBP23.29■■□□□ 1.32
SCARF1-207ENST00000573867 CFL1P23528 166 aaKnown RBP23.29■■□□□ 1.32
SCARF1-207ENST00000573867 CDC42P60953 191 aa23.29■■□□□ 1.32
SCARF1-207ENST00000573867 WDR86Q86TI4 376 aa23.29■■□□□ 1.32
SCARF1-207ENST00000573867 C9orf16Q9BUW7 83 aa23.29■■□□□ 1.32
SCARF1-207ENST00000573867 MROQ9BYG7 248 aa23.29■■□□□ 1.32
SCARF1-207ENST00000573867 RGCCQ9H4X1 137 aa23.29■■□□□ 1.32
SCARF1-207ENST00000573867 G6PC2Q9NQR9 355 aa23.29■■□□□ 1.32
SCARF1-207ENST00000573867 IKZF2Q9UKS7 526 aa23.29■■□□□ 1.32
SCARF1-207ENST00000573867 NOP16Q9Y3C1 178 aaKnown RBP23.29■■□□□ 1.32
SCARF1-207ENST00000573867 TMEM269A0A1B0GVZ9 245 aa23.28■■□□□ 1.32
SCARF1-207ENST00000573867 F5H0A9 414 aaPredicted RBP23.28■■□□□ 1.32
SCARF1-207ENST00000573867 ZNF254O75437 659 aa23.28■■□□□ 1.32
SCARF1-207ENST00000573867 PNPP00491 289 aa23.28■■□□□ 1.32
SCARF1-207ENST00000573867 DCTDP32321 178 aa23.28■■□□□ 1.32
SCARF1-207ENST00000573867 SEC61A1P61619 476 aaKnown RBP23.28■■□□□ 1.32
SCARF1-207ENST00000573867 PLEKHG7Q6ZR37 379 aa23.28■■□□□ 1.32
SCARF1-207ENST00000573867 TBX5Q99593 518 aa23.28■■□□□ 1.32
SCARF1-207ENST00000573867 PATZ1Q9HBE1 687 aaKnown RBP23.28■■□□□ 1.32
SCARF1-207ENST00000573867 TMEM165Q9HC07 324 aa23.28■■□□□ 1.32
SCARF1-207ENST00000573867 AASSQ9UDR5 926 aa23.28■■□□□ 1.32
SCARF1-207ENST00000573867 MRM2Q9UI43 246 aaKnown RBP23.28■■□□□ 1.32
SCARF1-207ENST00000573867 TRAV20A0A0B4J274 112 aa23.27■■□□□ 1.32
SCARF1-207ENST00000573867 ANKRD30BLA7E2S9 258 aa23.27■■□□□ 1.32
SCARF1-207ENST00000573867 ZNF670-ZNF695F2Z2N8 137 aa23.27■■□□□ 1.32
SCARF1-207ENST00000573867 ZFP36P26651 326 aaKnown RBP23.27■■□□□ 1.32
SCARF1-207ENST00000573867 MDH2P40926 338 aaKnown RBP23.27■■□□□ 1.32
SCARF1-207ENST00000573867 RIDAP52758 137 aaKnown RBP23.27■■□□□ 1.32
SCARF1-207ENST00000573867 KLBQ86Z14 1044 aa23.27■■□□□ 1.32
SCARF1-207ENST00000573867 SPICQ8N5J4 248 aa23.27■■□□□ 1.32
SCARF1-207ENST00000573867 C19orf18Q8NEA5 215 aa23.27■■□□□ 1.32
SCARF1-207ENST00000573867 ERGIC1Q969X5 290 aa23.27■■□□□ 1.32
SCARF1-207ENST00000573867 MNTQ99583 582 aa23.27■■□□□ 1.32
SCARF1-207ENST00000573867 PBOV1Q9GZY1 135 aa23.27■■□□□ 1.32
SCARF1-207ENST00000573867 IMPAD1Q9NX62 359 aa23.27■■□□□ 1.32
SCARF1-207ENST00000573867 FBN1P35555 2871 aaKnown RBP23.27■■□□□ 1.32
SCARF1-207ENST00000573867 CEACAM18A8MTB9 384 aa23.26■■□□□ 1.31
SCARF1-207ENST00000573867 ENTPD6O75354 484 aa23.26■■□□□ 1.31
SCARF1-207ENST00000573867 BAG2O95816 211 aa23.26■■□□□ 1.31
SCARF1-207ENST00000573867 IGLV3-1P01715 115 aa23.26■■□□□ 1.31
SCARF1-207ENST00000573867 ZBTB49Q6ZSB9 765 aa23.26■■□□□ 1.31
SCARF1-207ENST00000573867 ZNF826PQ6ZT77 177 aa23.26■■□□□ 1.31
SCARF1-207ENST00000573867 TRUB1Q8WWH5 349 aaKnown RBP23.26■■□□□ 1.31
SCARF1-207ENST00000573867 FGF23Q9GZV9 251 aaPredicted RBP23.26■■□□□ 1.31
SCARF1-207ENST00000573867 A0A1W2PQL4 384 aaPredicted RBP23.25■■□□□ 1.31
SCARF1-207ENST00000573867 ACOD1A6NK06 481 aa23.25■■□□□ 1.31
SCARF1-207ENST00000573867 LRRC30A6NM36 301 aa23.25■■□□□ 1.31
SCARF1-207ENST00000573867 ANKRD65E5RJM6 399 aa23.25■■□□□ 1.31
SCARF1-207ENST00000573867 GRPP07492 148 aa23.25■■□□□ 1.31
SCARF1-207ENST00000573867 ANPEPP15144 967 aa23.25■■□□□ 1.31
SCARF1-207ENST00000573867 LCN2P80188 198 aa23.25■■□□□ 1.31
SCARF1-207ENST00000573867 C1orf229Q6ZS94 237 aaPredicted RBP23.25■■□□□ 1.31
SCARF1-207ENST00000573867 KLHL36Q8N4N3 616 aa23.25■■□□□ 1.31
SCARF1-207ENST00000573867 SPERTQ8NA61 448 aa23.25■■□□□ 1.31
SCARF1-207ENST00000573867 CSNK2A3Q8NEV1 391 aa23.25■■□□□ 1.31
SCARF1-207ENST00000573867 TMEM246Q9BRR3 403 aa23.25■■□□□ 1.31
SCARF1-207ENST00000573867 PAPOLGQ9BWT3 736 aaKnown RBP23.25■■□□□ 1.31
SCARF1-207ENST00000573867 FN3KRPQ9HA64 309 aa23.25■■□□□ 1.31
SCARF1-207ENST00000573867 NUFIP1Q9UHK0 495 aaKnown RBP23.25■■□□□ 1.31
SCARF1-207ENST00000573867 A0A0U1RQV5 110 aa23.24■■□□□ 1.31
SCARF1-207ENST00000573867 PHYHO14832 338 aa23.24■■□□□ 1.31
SCARF1-207ENST00000573867 AVPP01185 164 aa23.24■■□□□ 1.31
SCARF1-207ENST00000573867 SRD5A1P18405 259 aa23.24■■□□□ 1.31
SCARF1-207ENST00000573867 SNRPGP62308 76 aaKnown RBP23.24■■□□□ 1.31
SCARF1-207ENST00000573867 EGR3Q06889 387 aa23.24■■□□□ 1.31
SCARF1-207ENST00000573867 POU4F2Q12837 409 aa23.24■■□□□ 1.31
SCARF1-207ENST00000573867 ZNF404Q494X3 552 aa23.24■■□□□ 1.31
SCARF1-207ENST00000573867 ZNF684Q5T5D7 378 aa23.24■■□□□ 1.31
SCARF1-207ENST00000573867 C11orf53Q8IXP5 236 aa23.24■■□□□ 1.31
SCARF1-207ENST00000573867 PLPP7Q8NBV4 271 aa23.24■■□□□ 1.31
SCARF1-207ENST00000573867 OR11L1Q8NGX0 322 aa23.24■■□□□ 1.31
SCARF1-207ENST00000573867 C1orf123Q9NWV4 160 aa23.24■■□□□ 1.31
SCARF1-207ENST00000573867 PCDHB10Q9UN67 800 aa23.24■■□□□ 1.31
SCARF1-207ENST00000573867 PPIAL4EA0A075B759 164 aa23.23■■□□□ 1.31
SCARF1-207ENST00000573867 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP23.23■■□□□ 1.31
SCARF1-207ENST00000573867 PPIAL4DF5H284 164 aa23.23■■□□□ 1.31
SCARF1-207ENST00000573867 DLGAP1O14490 977 aa23.23■■□□□ 1.31
SCARF1-207ENST00000573867 TTRP02766 147 aa23.23■■□□□ 1.31
SCARF1-207ENST00000573867 PPIAL4FP0DN26 164 aa23.23■■□□□ 1.31
SCARF1-207ENST00000573867 GABRB1P18505 474 aa23.23■■□□□ 1.31
SCARF1-207ENST00000573867 HNF1AP20823 631 aa23.23■■□□□ 1.31
SCARF1-207ENST00000573867 TMED1Q13445 227 aa23.23■■□□□ 1.31
SCARF1-207ENST00000573867 ZNF829Q3KNS6 432 aaPredicted RBP23.23■■□□□ 1.31
SCARF1-207ENST00000573867 SLC25A30Q5SVS4 291 aa23.23■■□□□ 1.31
SCARF1-207ENST00000573867 C1orf87Q8N0U7 546 aa23.23■■□□□ 1.31
SCARF1-207ENST00000573867 MUC20Q8N307 709 aaPredicted RBP23.23■■□□□ 1.31
SCARF1-207ENST00000573867 OR8S1Q8NH09 359 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms