RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 GPR160Q9UJ42 338 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 PURGQ9UJV8 347 aaKnown RBP11.32□□□□□ -0.6
CCDC40-205ENST00000571028 TENM1Q9UKZ4 2725 aa11.32□□□□□ -0.6
CCDC40-205ENST00000571028 PLSCR5A0PG75 271 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 LRP5LA4QPB2 252 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 FAM157AC9JC47 383 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 PTGES3LE9PB15 166 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 LOC110117498-PIK3R3F6TDL0 507 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 H3BSH0 61 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 TPD52L2O43399 206 aaKnown RBP11.31□□□□□ -0.6
CCDC40-205ENST00000571028 ZNF254O75437 659 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 PNPP00491 289 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 IGHV3-13P01766 116 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 MT-ND5P03915 603 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 RAC2P15153 192 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 MYF6P23409 242 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 ZNF81P51508 661 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 OR12D2P58182 307 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 PSMA6P60900 246 aaKnown RBP11.31□□□□□ -0.6
CCDC40-205ENST00000571028 GK2Q14410 553 aaPredicted RBP11.31□□□□□ -0.6
CCDC40-205ENST00000571028 MOGQ16653 247 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 TSTQ16762 297 aaKnown RBP11.31□□□□□ -0.6
CCDC40-205ENST00000571028 DEGS2Q6QHC5 323 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 AHSA2Q719I0 299 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 PGAP1Q75T13 922 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 RHOUQ7L0Q8 258 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 STX19Q8N4C7 294 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 SEMA6DQ8NFY4 1073 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 OR8B12Q8NGG6 310 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 SPRYD4Q8WW59 207 aaPredicted RBP11.31□□□□□ -0.6
CCDC40-205ENST00000571028 SGK3Q96BR1 496 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 HAVCR1Q96D42 359 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 REEP6Q96HR9 211 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 C4orf36Q96KX1 117 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 SOX7Q9BT81 388 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 ALG8Q9BVK2 526 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 PBOV1Q9GZY1 135 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 ACOXLQ9NUZ1 547 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 FAM206AQ9NX38 181 aa11.31□□□□□ -0.6
CCDC40-205ENST00000571028 MALRD1Q5VYJ5 2156 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 IGLV3-9A0A075B6K5 115 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 IRGMA1A4Y4 181 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 TRIM77I1YAP6 450 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 J3QRE1 110 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 J3QW42 95 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 XRCC2O43543 280 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 RGS9O75916 674 aaPredicted RBP11.3□□□□□ -0.6
CCDC40-205ENST00000571028 ERCC1P07992 297 aaPredicted RBP11.3□□□□□ -0.6
CCDC40-205ENST00000571028 TUBG1P23258 451 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 EVX1P49640 407 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 ETV1P50549 477 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 MVKQ03426 396 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 ST3GAL4Q11206 333 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 C6orf141Q5SZD1 244 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 FBXW12Q6X9E4 464 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 PRSS45Q7RTY3 260 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 FBLIM1Q8WUP2 373 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 HPS1Q92902 700 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 SIGLEC11Q96RL6 698 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 ZNF184Q99676 751 aaPredicted RBP11.3□□□□□ -0.6
CCDC40-205ENST00000571028 ANKRD60Q9BZ19 345 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 RAB1BQ9H0U4 201 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 Q9H521 79 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 ISG20L2Q9H9L3 353 aaKnown RBP11.3□□□□□ -0.6
CCDC40-205ENST00000571028 TUBG2Q9NRH3 451 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 CHCHD3Q9NX63 227 aaKnown RBP11.3□□□□□ -0.6
CCDC40-205ENST00000571028 ERVK13-1Q9NX77 482 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 OR52A1Q9UKL2 312 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 RAB26Q9ULW5 256 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 SLC22A13Q9Y226 551 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 PCDHGB5Q9Y5G0 923 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 R4GMQ9 66 aa11.3□□□□□ -0.6
CCDC40-205ENST00000571028 IGHV3-64DA0A0J9YX35 117 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 EFCAB10A6NFE3 127 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 ZSCAN5BA6NJL1 495 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 IGHA1P01876 353 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 TACSTD2P09758 323 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 MYL12AP19105 171 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 KITLGP21583 273 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 MAGEB1P43366 347 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 PPOXP50336 477 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 DEFA6Q01524 100 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 GALEQ14376 348 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 ZNF684Q5T5D7 378 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 BCL2L15Q5TBC7 163 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 ZNF786Q8N393 782 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 OR2Z1Q8NG97 314 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 OR52H1Q8NGJ2 320 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 MRPL48Q96GC5 212 aaKnown RBP11.29□□□□□ -0.6
CCDC40-205ENST00000571028 TMEM80Q96HE8 168 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 FAM71F1Q96KD3 344 aaPredicted RBP11.29□□□□□ -0.6
CCDC40-205ENST00000571028 MS4A5Q9H3V2 200 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 FGF20Q9NP95 211 aaPredicted RBP11.29□□□□□ -0.6
CCDC40-205ENST00000571028 MRPS18AQ9NVS2 196 aaKnown RBP11.29□□□□□ -0.6
CCDC40-205ENST00000571028 SCN3BQ9NY72 215 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 PSORS1C1Q9UIG5 152 aa11.29□□□□□ -0.6
CCDC40-205ENST00000571028 A0A0G2JK05 382 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 TMEM89A2RUT3 159 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 CD300LBA8K4G0 201 aa11.28□□□□□ -0.6
CCDC40-205ENST00000571028 C17orf100A8MU93 164 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms