RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 A0A1B0GVI7 797 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 MEIOCA2RUB1 952 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 BTBD17A6NE02 478 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 ANKRD61A6NGH8 418 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-220ENST00000569827 NPFFO15130 113 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 TBX1O43435 398 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 GMDSO60547 372 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 LHBP01229 141 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 GYPBP06028 91 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 FBP1P09467 338 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 COX4I1P13073 169 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 RHCEP18577 417 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 AMY2BP19961 511 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 NOS3P29474 1203 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 ECH1Q13011 328 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 GFOD2Q3B7J2 385 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 SLC36A3Q495N2 470 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 Q6ZPA2 131 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 DCXRQ7Z4W1 244 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 ARPINQ7Z6K5 226 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 PROKR2Q8NFJ6 384 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 PPP1R35Q8TAP8 253 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 LRTOMTQ8WZ04 291 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 RORBQ92753 470 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 SPTSSAQ969W0 71 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 C7orf34Q96L11 122 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 COPS4Q9BT78 406 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 EGLN3Q9H6Z9 239 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 ELL3Q9HB65 397 aaPredicted RBP9.89□□□□□ -0.83
CAPN3-220ENST00000569827 CENPMQ9NSP4 180 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 KPTNQ9Y664 436 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 COL7A1Q02388 2944 aa9.89□□□□□ -0.83
CAPN3-220ENST00000569827 TSPAN9O75954 239 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 SPARCP09486 303 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 ZNF823P16415 610 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 SAA4P35542 130 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 NUDT2P50583 147 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 SAMD5Q5TGI4 173 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 TEX36Q5VZQ5 186 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 C8orf82Q6P1X6 216 aaPredicted RBP9.88□□□□□ -0.83
CAPN3-220ENST00000569827 WDR82Q6UXN9 313 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 LINC00471Q8N535 108 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 LY6G5BQ8NDX9 201 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 OR8S1Q8NH09 359 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 DHRS1Q96LJ7 313 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 SLC22A4Q9H015 551 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 WDR13Q9H1Z4 485 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 MRPL15Q9P015 296 aaKnown RBP9.88□□□□□ -0.83
CAPN3-220ENST00000569827 COMMD3-BMI1R4GMX3 469 aa9.88□□□□□ -0.83
CAPN3-220ENST00000569827 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-220ENST00000569827 H3BUX3 64 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 ARPC3O15145 178 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 NDUFA2O43678 99 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 ALX3O95076 343 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 GADD45GO95257 159 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 ECDO95905 644 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-220ENST00000569827 PAHP00439 452 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 CLUP10909 449 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 GABRA5P31644 462 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 OTX1P32242 354 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-220ENST00000569827 TAF13Q15543 124 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 MICBQ29980 383 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 FBLN7Q53RD9 439 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 GLYATQ6IB77 296 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 SLC16A9Q7RTY1 509 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 DPY19L4Q7Z388 723 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 ZDHHC21Q8IVQ6 265 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 ZNF511Q8NB15 262 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 OR1M1Q8NGA1 313 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 SLAMF6Q96DU3 332 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 KRCC1Q9NPI7 259 aaPredicted RBP9.87□□□□□ -0.83
CAPN3-220ENST00000569827 TRIM36Q9NQ86 728 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 C14orf119Q9NWQ9 140 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 DNAJC27Q9NZQ0 273 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 KAAG1Q9UBP8 84 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 ZNF391Q9UJN7 358 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 PRPF19Q9UMS4 504 aaKnown RBP9.87□□□□□ -0.83
CAPN3-220ENST00000569827 NOP16Q9Y3C1 178 aaKnown RBP9.87□□□□□ -0.83
CAPN3-220ENST00000569827 RYR3Q15413 4870 aa9.87□□□□□ -0.83
CAPN3-220ENST00000569827 ANKRD30BLA7E2S9 258 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 CDIPTO14735 213 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 PIN1P1O15428 100 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 NDUFB3O43676 98 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 SASH3O75995 380 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 ANXA2P07355 339 aaKnown RBP9.86□□□□□ -0.83
CAPN3-220ENST00000569827 EEF1B2P24534 225 aaKnown RBP9.86□□□□□ -0.83
CAPN3-220ENST00000569827 MSX2P35548 267 aaPredicted RBP9.86□□□□□ -0.83
CAPN3-220ENST00000569827 TGFBR2P37173 567 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 CX3CR1P49238 355 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 FAM3AP98173 230 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 KRT72Q14CN4 511 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 HERPUD1Q15011 391 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 NSUN5P1Q3KNT7 163 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 KLHL12Q53G59 568 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 OXLD1Q5BKU9 147 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 DRAM2Q6UX65 266 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 Q6ZTK2 550 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 KLHDC1Q8N7A1 406 aa9.86□□□□□ -0.83
CAPN3-220ENST00000569827 PLPP7Q8NBV4 271 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms