RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 FAM86B1Q8N7N1 296 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 CELF2-AS1Q8N7Q2 184 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 OR52J3Q8NH60 311 aa12.15□□□□□ -0.46
USB1-214ENST00000568848 H1FXQ92522 213 aaKnown RBP12.15□□□□□ -0.46
USB1-214ENST00000568848 KCTD14Q9BQ13 255 aaPredicted RBP12.15□□□□□ -0.46
USB1-214ENST00000568848 OR6C68A6NDL8 312 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 UNC119BA6NIH7 251 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 M0R135 149 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 AHCYL1O43865 530 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 PTBP3O95758 552 aaKnown RBP12.14□□□□□ -0.47
USB1-214ENST00000568848 HLA-DQA2P01906 255 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 FBP1P09467 338 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 VSIG10L2P0DP72 767 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 HIST1H1CP16403 213 aaKnown RBP12.14□□□□□ -0.47
USB1-214ENST00000568848 PRKXP51817 358 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 MALLQ13021 153 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 RFX4Q33E94 735 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 SLC35F1Q5T1Q4 408 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 GPR139Q6DWJ6 353 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 FKBP9P1Q75LS8 142 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 RNF113BQ8IZP6 322 aaKnown RBP12.14□□□□□ -0.47
USB1-214ENST00000568848 RNF148Q8N7C7 305 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 LY6G5BQ8NDX9 201 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 OR51L1Q8NGJ5 315 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 TNFRSF14Q92956 283 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 ERGIC1Q969X5 290 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 FAM162AQ96A26 154 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 CMTM5Q96DZ9 223 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 ZNF799Q96GE5 643 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 GPX7Q96SL4 187 aaPredicted RBP12.14□□□□□ -0.47
USB1-214ENST00000568848 NSRP1Q9H0G5 558 aaKnown RBP12.14□□□□□ -0.47
USB1-214ENST00000568848 CYB5R1Q9UHQ9 305 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 V9GYQ6 96 aa12.14□□□□□ -0.47
USB1-214ENST00000568848 A0A1B0GVI7 797 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 BTBD17A6NE02 478 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 LHBP01229 141 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 PRDX6P30041 224 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 IFNA8P32881 189 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 EFNB2P52799 333 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 SMARCD3Q6STE5 483 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 Q6ZTK2 550 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 RRM2BQ7LG56 351 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 ADCK1Q86TW2 530 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 CYB561A3Q8NBI2 242 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 FANK1Q8TC84 345 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 LRTOMTQ8WZ04 291 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 WDR13Q9H1Z4 485 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 MMP28Q9H239 520 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 ABCD2Q9UBJ2 740 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 AURKCQ9UQB9 309 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 KPTNQ9Y664 436 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 ENPP4Q9Y6X5 453 aa12.13□□□□□ -0.47
USB1-214ENST00000568848 HTR3EA5X5Y0 456 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 GPR37O15354 613 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 CHST1O43916 411 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 TXNDC12O95881 172 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 PAHP00439 452 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 H1F0P07305 194 aaKnown RBP12.12□□□□□ -0.47
USB1-214ENST00000568848 CD28P10747 220 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 TGFBR2P37173 567 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 RPS6KA3P51812 740 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 ERVFRD-1P60508 538 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 KCNJ8Q15842 424 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 PLA1AQ53H76 456 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 TEX36Q5VZQ5 186 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 GLYATQ6IB77 296 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 HCP5Q6MZN7 132 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 CCBE1Q6UXH8 406 aaPredicted RBP12.12□□□□□ -0.47
USB1-214ENST00000568848 DPY19L2P2Q6ZN68 376 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 OR2AJ1Q8NGZ0 328 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 SGCDQ92629 289 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 AJUBAQ96IF1 538 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 FGF23Q9GZV9 251 aaPredicted RBP12.12□□□□□ -0.47
USB1-214ENST00000568848 ARL8BQ9NVJ2 186 aa12.12□□□□□ -0.47
USB1-214ENST00000568848 CRABP1P29762 137 aa12.11□□□□□ -0.47
USB1-214ENST00000568848 MSX2P35548 267 aaPredicted RBP12.11□□□□□ -0.47
USB1-214ENST00000568848 TPTEP56180 551 aa12.11□□□□□ -0.47
USB1-214ENST00000568848 LOXL3P58215 753 aa12.11□□□□□ -0.47
USB1-214ENST00000568848 WDR82Q6UXN9 313 aa12.11□□□□□ -0.47
USB1-214ENST00000568848 PIGWQ7Z7B1 504 aa12.11□□□□□ -0.47
USB1-214ENST00000568848 PHF21AQ96BD5 680 aa12.11□□□□□ -0.47
USB1-214ENST00000568848 NKX3-1Q99801 234 aaPredicted RBP12.11□□□□□ -0.47
USB1-214ENST00000568848 SSX3Q99909 188 aa12.11□□□□□ -0.47
USB1-214ENST00000568848 IFT27Q9BW83 186 aa12.11□□□□□ -0.47
USB1-214ENST00000568848 OR52D1Q9H346 318 aa12.11□□□□□ -0.47
USB1-214ENST00000568848 SPAG4Q9NPE6 437 aa12.11□□□□□ -0.47
USB1-214ENST00000568848 NDUFAF4Q9P032 175 aa12.11□□□□□ -0.47
USB1-214ENST00000568848 FBLN5Q9UBX5 448 aa12.11□□□□□ -0.47
USB1-214ENST00000568848 ZNF391Q9UJN7 358 aa12.11□□□□□ -0.47
USB1-214ENST00000568848 PRPF19Q9UMS4 504 aaKnown RBP12.11□□□□□ -0.47
USB1-214ENST00000568848 TMEM5Q9Y2B1 443 aa12.11□□□□□ -0.47
USB1-214ENST00000568848 TENM3Q9P273 2699 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 BHLHE40O14503 412 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 NDUFAB1O14561 156 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 GMDSO60547 372 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 MPIG6BO95866 241 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 RENP00797 406 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 BMXP51813 675 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 ECH1Q13011 328 aa12.1□□□□□ -0.47
USB1-214ENST00000568848 DGUOKQ16854 277 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms