RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 SPICQ8N5J4 248 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 RFLNBQ8N5W9 214 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 YIPF7Q8N8F6 280 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 OR8S1Q8NH09 359 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 RNFT2Q96EX2 444 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 TBX5Q99593 518 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 GAL3ST1Q99999 423 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 PAPOLGQ9BWT3 736 aaKnown RBP10.99□□□□□ -0.65
CLK3-224ENST00000568605 NARFLQ9H6Q4 476 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 GCM1Q9NP62 436 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 YAE1D1Q9NRH1 226 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 FAM118AQ9NWS6 357 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 FAM206AQ9NX38 181 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 NUFIP1Q9UHK0 495 aaKnown RBP10.99□□□□□ -0.65
CLK3-224ENST00000568605 KCNS2Q9ULS6 477 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 NPTNQ9Y639 398 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 CACNG2Q9Y698 323 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 SONP18583 2426 aaKnown RBP10.99□□□□□ -0.65
CLK3-224ENST00000568605 SETD2Q9BYW2 2564 aaPredicted RBP10.98□□□□□ -0.65
CLK3-224ENST00000568605 H0YHG0 523 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 H0YL77 283 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 ENTPD6O75354 484 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 MTRF1O75570 445 aaKnown RBP10.98□□□□□ -0.65
CLK3-224ENST00000568605 SULT1C4O75897 302 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 APOL3O95236 402 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 HLA-DPB1P04440 258 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 ATP6V1B1P15313 513 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 MAP2K3P46734 347 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 GSK3AP49840 483 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 ACTA2P62736 377 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 ACTG2P63267 376 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 LPCAT4Q643R3 524 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 ENTHD1Q8IYW4 607 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 KLHL36Q8N4N3 616 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 LINC01356Q8N9X3 169 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 PLPP7Q8NBV4 271 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 CLDND2Q8NHS1 167 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 CYGBQ8WWM9 190 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 SGK3Q96BR1 496 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 PBOV1Q9GZY1 135 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 FN3KRPQ9HA64 309 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 TREM2Q9NZC2 230 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 SNX5Q9Y5X3 404 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 R4GMQ9 66 aa10.98□□□□□ -0.65
CLK3-224ENST00000568605 LOC100289279A0A1B0GTE1 492 aa10.97□□□□□ -0.65
CLK3-224ENST00000568605 A0A1W2PQL4 384 aaPredicted RBP10.97□□□□□ -0.65
CLK3-224ENST00000568605 C5orf63A6NC05 138 aa10.97□□□□□ -0.65
CLK3-224ENST00000568605 B4DSR2 109 aa10.97□□□□□ -0.65
CLK3-224ENST00000568605 CASQ2O14958 399 aaPredicted RBP10.97□□□□□ -0.65
CLK3-224ENST00000568605 DBTP11182 482 aaKnown RBP10.97□□□□□ -0.65
CLK3-224ENST00000568605 ANOS1P23352 680 aa10.97□□□□□ -0.65
CLK3-224ENST00000568605 MDH2P40926 338 aaKnown RBP10.97□□□□□ -0.65
CLK3-224ENST00000568605 BTG1P62324 171 aa10.97□□□□□ -0.65
CLK3-224ENST00000568605 ELF3P78545 371 aaPredicted RBP10.97□□□□□ -0.65
CLK3-224ENST00000568605 IL5RAQ01344 420 aa10.97□□□□□ -0.65
CLK3-224ENST00000568605 ZNF91Q05481 1191 aa10.97□□□□□ -0.65
CLK3-224ENST00000568605 IL18R1Q13478 541 aa10.97□□□□□ -0.65
CLK3-224ENST00000568605 OGFRL1Q5TC84 451 aaPredicted RBP10.97□□□□□ -0.65
CLK3-224ENST00000568605 THAP5Q7Z6K1 395 aa10.97□□□□□ -0.65
CLK3-224ENST00000568605 MOGAT3Q86VF5 341 aa10.97□□□□□ -0.65
CLK3-224ENST00000568605 DHRSXQ8N5I4 330 aa10.97□□□□□ -0.65
CLK3-224ENST00000568605 MICU1Q9BPX6 476 aa10.97□□□□□ -0.65
CLK3-224ENST00000568605 PCDHB10Q9UN67 800 aa10.97□□□□□ -0.65
CLK3-224ENST00000568605 MPC1Q9Y5U8 109 aa10.97□□□□□ -0.65
CLK3-224ENST00000568605 FN1P02751 2386 aaKnown RBP10.97□□□□□ -0.65
CLK3-224ENST00000568605 ZNF816-ZNF321PA0A0X1KG74 233 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 DAPL1A0PJW8 107 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 IRGMA1A4Y4 181 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 METTL15A6NJ78 407 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 A6NLC8 198 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 PRR32B1ATL7 298 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 FADS2O95864 444 aaKnown RBP10.96□□□□□ -0.65
CLK3-224ENST00000568605 IGHV2-70P01814 119 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 GABRB1P18505 474 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 HNF1AP20823 631 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 MFGE8Q08431 387 aaPredicted RBP10.96□□□□□ -0.65
CLK3-224ENST00000568605 RAB40BQ12829 278 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 TMEM155Q4W5P6 130 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 SPRNQ5BIV9 151 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 ZBTB37Q5TC79 503 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 GLCCI1Q86VQ1 547 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 ACBD7Q8N6N7 88 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 SEMA6DQ8NFY4 1073 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 OR51F2Q8NH61 342 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 RHOXF1Q8NHV9 184 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 ZNF420Q8TAQ5 688 aaPredicted RBP10.96□□□□□ -0.65
CLK3-224ENST00000568605 Q8TCH9 128 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 DVL3Q92997 716 aaPredicted RBP10.96□□□□□ -0.65
CLK3-224ENST00000568605 UBE2FQ969M7 185 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 MSI2Q96DH6 328 aaKnown RBP10.96□□□□□ -0.65
CLK3-224ENST00000568605 SIGLEC11Q96RL6 698 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 RTL8AQ9BWD3 113 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 ZNF665Q9H7R5 613 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 PLEKHA1Q9HB21 404 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 GPR84Q9NQS5 396 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 INPP5EQ9NRR6 644 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 TMEM160Q9NX00 188 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 UBAP1Q9NZ09 502 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 ZNF319Q9P2F9 582 aa10.96□□□□□ -0.65
CLK3-224ENST00000568605 LPAR3Q9UBY5 353 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms