RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 C1orf147Q96MC9 270 aaPredicted RBP15.88■□□□□ 0.13
SMPD3-211ENST00000568373 NUDT16L1Q9BRJ7 211 aaKnown RBP15.88■□□□□ 0.13
SMPD3-211ENST00000568373 SEC22CQ9BRL7 303 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 SLC6A15Q9H2J7 730 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 GPR35Q9HC97 309 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 ING4Q9UNL4 249 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 KLF13Q9Y2Y9 288 aaPredicted RBP15.88■□□□□ 0.13
SMPD3-211ENST00000568373 NME2P1O60361 137 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 SLC34A2O95436 690 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 CYB5AP00167 134 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 NME2P22392 152 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 CD82P27701 267 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 GSK3AP49840 483 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 ZP1P60852 638 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 BCL2A1Q16548 175 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 SNAI3Q3KNW1 292 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 ATP1A1-AS1Q5TC04 95 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 ZNF774Q6NX45 483 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 SEZ6L2Q6UXD5 910 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.88■□□□□ 0.13
SMPD3-211ENST00000568373 OR1F12Q8NHA8 337 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 OR10A2Q9H208 303 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 KLK13Q9UKR3 277 aa15.88■□□□□ 0.13
SMPD3-211ENST00000568373 MTRF1O75570 445 aaKnown RBP15.87■□□□□ 0.13
SMPD3-211ENST00000568373 PRF1P14222 555 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 ZNF32P17041 273 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 CHST4Q8NCG5 386 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 PP6455Q8WZ26 134 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 C10orf35Q96D05 121 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 SLA2Q9H6Q3 261 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 RANBP3Q9H6Z4 567 aaPredicted RBP15.87■□□□□ 0.13
SMPD3-211ENST00000568373 GPN1Q9HCN4 374 aaPredicted RBP15.87■□□□□ 0.13
SMPD3-211ENST00000568373 NPDC1Q9NQX5 325 aaPredicted RBP15.87■□□□□ 0.13
SMPD3-211ENST00000568373 NOSIPQ9Y314 301 aaKnown RBP15.87■□□□□ 0.13
SMPD3-211ENST00000568373 CELSR3Q9NYQ7 3312 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 ZNF407Q9C0G0 2248 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 OR6C6A6NF89 314 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 SNRPGP15A8MWD9 76 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 CDK2AP1O14519 115 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 ALX3O95076 343 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 RAB3DO95716 219 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 MELTFP08582 738 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 FTH1P19P0C7X4 201 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 FAHP16930 419 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 MEOX1P50221 254 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 TGIF1Q15583 401 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 CDNFQ49AH0 187 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 SFRP5Q5T4F7 317 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 MEIOBQ8N635 442 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 KCNG3Q8TAE7 436 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 GPER1Q99527 375 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 CHST5Q9GZS9 411 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 LPAR5Q9H1C0 372 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 ZNF224Q9NZL3 707 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 NPTNQ9Y639 398 aa15.87■□□□□ 0.13
SMPD3-211ENST00000568373 DNAJC13O75165 2243 aa15.86■□□□□ 0.13
SMPD3-211ENST00000568373 ZNF736B4DX44 427 aaPredicted RBP15.86■□□□□ 0.13
SMPD3-211ENST00000568373 KLRC4-KLRK1H3BQV0 150 aa15.86■□□□□ 0.13
SMPD3-211ENST00000568373 CREBL2O60519 120 aaPredicted RBP15.86■□□□□ 0.13
SMPD3-211ENST00000568373 MRPL33O75394 65 aaKnown RBP15.86■□□□□ 0.13
SMPD3-211ENST00000568373 GSTT2P0CG29 244 aa15.86■□□□□ 0.13
SMPD3-211ENST00000568373 CPN1P15169 458 aa15.86■□□□□ 0.13
SMPD3-211ENST00000568373 KRTAP27-1Q3LI81 207 aa15.86■□□□□ 0.13
SMPD3-211ENST00000568373 ZNF626Q68DY1 528 aa15.86■□□□□ 0.13
SMPD3-211ENST00000568373 LAMTOR1Q6IAA8 161 aa15.86■□□□□ 0.13
SMPD3-211ENST00000568373 FJX1Q86VR8 437 aa15.86■□□□□ 0.13
SMPD3-211ENST00000568373 ZNF584Q8IVC4 421 aa15.86■□□□□ 0.13
SMPD3-211ENST00000568373 TMEM104Q8NE00 496 aa15.86■□□□□ 0.13
SMPD3-211ENST00000568373 OR10R2Q8NGX6 335 aa15.86■□□□□ 0.13
SMPD3-211ENST00000568373 SGK3Q96BR1 496 aa15.86■□□□□ 0.13
SMPD3-211ENST00000568373 PIGLQ9Y2B2 252 aa15.86■□□□□ 0.13
SMPD3-211ENST00000568373 TIMM10BQ9Y5J6 103 aa15.86■□□□□ 0.13
SMPD3-211ENST00000568373 CDRT15L2A8MXV6 281 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 SYNGR4O95473 234 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 CD74P04233 296 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 CHRM2P08172 466 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 PATE4P0C8F1 98 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 UBBP0CG47 229 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 HOXD11P31277 338 aaPredicted RBP15.85■□□□□ 0.13
SMPD3-211ENST00000568373 PCBD1P61457 104 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 PSG4Q00888 419 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 KISS1Q15726 138 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 UBE2V2Q15819 145 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 SLC16A14Q7RTX9 510 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 SLC36A1Q7Z2H8 476 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 PNLDC1Q8NA58 520 aaKnown RBP15.85■□□□□ 0.13
SMPD3-211ENST00000568373 AKR7LQ8NHP1 331 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 ZNF436Q9C0F3 470 aaPredicted RBP15.85■□□□□ 0.13
SMPD3-211ENST00000568373 PTTG3PQ9NZH4 202 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 ZNF69Q9UC07 566 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 MYO7BQ6PIF6 2116 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 SPAARA0A1B0GVQ0 90 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 ARGFXA6NJG6 315 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 A6NL46 340 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 CDC14BO60729 498 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 MPIG6BO95866 241 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 VSIG10L2P0DP72 767 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 HTR5AP47898 357 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 HGFACQ04756 655 aa15.85■□□□□ 0.13
SMPD3-211ENST00000568373 RSPO4Q2I0M5 234 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms