RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ANOS1P23352 680 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 MPZP25189 248 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 OR3A2P47893 321 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 GABREP78334 506 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 BLOC1S1P78537 153 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 GUCA2BQ16661 112 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 FAM57BQ71RH2 274 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 ZNF283Q8N7M2 679 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 BHLHE23Q8NDY6 225 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 KCNG3Q8TAE7 436 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 ZNF501Q96CX3 271 aaPredicted RBP12.61□□□□□ -0.39
CDH1-209ENST00000566510 C5orf66Q9H5L9 145 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 METTL7AQ9H8H3 244 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 TREM1Q9NP99 234 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 ZNF319Q9P2F9 582 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 B3GAT1Q9P2W7 334 aa12.61□□□□□ -0.39
CDH1-209ENST00000566510 NCOA6Q14686 2063 aaPredicted RBP12.6□□□□□ -0.39
CDH1-209ENST00000566510 IGHG1P01857 330 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 HIST1H1DP16402 221 aaKnown RBP12.6□□□□□ -0.39
CDH1-209ENST00000566510 PRKACAP17612 351 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 AMY2BP19961 511 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 CYCSP99999 105 aaKnown RBP12.6□□□□□ -0.39
CDH1-209ENST00000566510 HAGHLQ6PII5 290 aaPredicted RBP12.6□□□□□ -0.39
CDH1-209ENST00000566510 CLEC18BQ6UXF7 455 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 PUSL1Q8N0Z8 303 aaKnown RBP12.6□□□□□ -0.39
CDH1-209ENST00000566510 ZSCAN4Q8NAM6 433 aaPredicted RBP12.6□□□□□ -0.39
CDH1-209ENST00000566510 PLPP5Q8NEB5 264 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 OR5H2Q8NGV7 314 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 ZC3H10Q96K80 434 aaKnown RBP12.6□□□□□ -0.39
CDH1-209ENST00000566510 RNF126Q9BV68 326 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 CA14Q9ULX7 337 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 ACTL6AO96019 429 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 F12P00748 615 aaPredicted RBP12.6□□□□□ -0.39
CDH1-209ENST00000566510 DHPSP49366 369 aaPredicted RBP12.6□□□□□ -0.39
CDH1-209ENST00000566510 GPR85P60893 370 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 SRSF3P84103 164 aaKnown RBP12.6□□□□□ -0.39
CDH1-209ENST00000566510 ZNF585AQ6P3V2 769 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 UQCC3Q6UW78 93 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 TMEM200AQ86VY9 491 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 SVBPQ8N300 66 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 RNF141Q8WVD5 230 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 NMES1Q9C002 83 aa12.6□□□□□ -0.39
CDH1-209ENST00000566510 TEX13DA0A0J9YY54 714 aaPredicted RBP12.59□□□□□ -0.39
CDH1-209ENST00000566510 DBX1A6NMT0 343 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 ZNF705EA8MWA4 302 aaPredicted RBP12.59□□□□□ -0.39
CDH1-209ENST00000566510 H0YIZ8 118 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 H7C2Y5 167 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 RAD51DO75771 328 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 PIAS2O75928 621 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 CX3CR1P49238 355 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 TMEM50BP56557 158 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 S100A10P60903 97 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 PLEKHN1Q494U1 663 aaPredicted RBP12.59□□□□□ -0.39
CDH1-209ENST00000566510 TMPRSS9Q7Z410 1059 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 ANKRD37Q7Z713 158 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 SLC38A9Q8NBW4 561 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 OR51T1Q8NGJ9 327 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 OR6S1Q8NH40 331 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 ELL3Q9HB65 397 aaPredicted RBP12.59□□□□□ -0.39
CDH1-209ENST00000566510 EXPH5Q8NEV8 1989 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 RAB19A4D1S5 217 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 MSGN1A6NI15 193 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 FOSL2P15408 326 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 GSK3AP49840 483 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 CBLN2Q8IUK8 224 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 OR5AS1Q8N127 324 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 OR10G3Q8NGC4 313 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 ARL11Q969Q4 196 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 MRPL13Q9BYD1 178 aaKnown RBP12.59□□□□□ -0.39
CDH1-209ENST00000566510 HRH4Q9H3N8 390 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 OR5AC2Q9NZP5 309 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 PURGQ9UJV8 347 aaKnown RBP12.59□□□□□ -0.39
CDH1-209ENST00000566510 GPR132Q9UNW8 380 aa12.59□□□□□ -0.39
CDH1-209ENST00000566510 KNG1P01042 644 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 HOXB5P09067 269 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 GSTP1P09211 210 aaKnown RBP12.58□□□□□ -0.4
CDH1-209ENST00000566510 QDPRP09417 244 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 GLULP15104 373 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 NXPH1P58417 271 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 CSNK2A1P68400 391 aaPredicted RBP12.58□□□□□ -0.4
CDH1-209ENST00000566510 PABPC1L2AQ5JQF8 200 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 PGAP1Q75T13 922 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 NAA40Q86UY6 237 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 CSNK2A3Q8NEV1 391 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 NOXO1Q8NFA2 376 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 TMEM230Q96A57 120 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 CPNE2Q96FN4 548 aaPredicted RBP12.58□□□□□ -0.4
CDH1-209ENST00000566510 ZNF629Q9UEG4 869 aaPredicted RBP12.58□□□□□ -0.4
CDH1-209ENST00000566510 MLXQ9UH92 298 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 FLVCR1Q9Y5Y0 555 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 EML6Q6ZMW3 1958 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 NPIPB13A6NJU9 1138 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 ZNF726A6NNF4 738 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 ZNF814B7Z6K7 855 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 NPIPB4C9JG80 1138 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 SFT2D2O95562 160 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 SFTPBP07988 381 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 PGA4P0DJD7 388 aa12.58□□□□□ -0.4
CDH1-209ENST00000566510 PGA3P0DJD8 388 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms