RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ETHE1O95571 254 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 CATP04040 527 aaKnown RBP3.33□□□□□ -1.88
CNOT1-209ENST00000566240 PGA4P0DJD7 388 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 PGA3P0DJD8 388 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 HCAR3P49019 387 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 ERCC8Q13216 396 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 MKXQ8IYA7 352 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 OR13C9Q8NGT0 318 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 TM6SF2Q9BZW4 377 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 SPNS1Q9H2V7 528 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 KIR3DX1Q9H7L2 352 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 NOX3Q9HBY0 568 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 RBAKQ9NYW8 714 aaPredicted RBP3.33□□□□□ -1.88
CNOT1-209ENST00000566240 ADA2Q9NZK5 511 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 A0A1W2PP64 1363 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 POLR3AO14802 1390 aaPredicted RBP3.33□□□□□ -1.88
CNOT1-209ENST00000566240 PPIP5K1Q6PFW1 1433 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 NKTRP30414 1462 aaKnown RBP3.33□□□□□ -1.88
CNOT1-209ENST00000566240 CDK12Q9NYV4 1490 aaPredicted RBP3.33□□□□□ -1.88
CNOT1-209ENST00000566240 LRRC7Q96NW7 1537 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 ADAMTSL3P82987 1691 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 NALCNQ8IZF0 1738 aa3.33□□□□□ -1.88
CNOT1-209ENST00000566240 MAP2P11137 1827 aaKnown RBP3.33□□□□□ -1.88
CNOT1-209ENST00000566240 TDRD6O60522 2096 aaKnown RBP3.32□□□□□ -1.88
CNOT1-209ENST00000566240 GSTTP1A0A1W2PQM5 241 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 OR6C74A6NCV1 312 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 ERICH4A6NGS2 130 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 A8MU10 97 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 BCHEP06276 602 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 GFAPP14136 432 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 PFN2P35080 140 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 AP1S2P56377 157 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 ARG2P78540 354 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 KIR2DS1Q14954 304 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 FBXO48Q5FWF7 155 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 PRMT9Q6P2P2 845 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 FAM92BQ6ZTR7 304 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 ZNF433Q8N7K0 673 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-209ENST00000566240 COX18Q8N8Q8 333 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 OR11H7Q8NGC8 314 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 ABHD3Q8WU67 409 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 BAALCQ8WXS3 180 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 RGP1Q92546 391 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-209ENST00000566240 TFGQ92734 400 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-209ENST00000566240 C19orf60Q96EN9 201 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 SGTBQ96EQ0 304 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 BTN2A3PQ96KV6 586 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 CEP170P1Q96L14 293 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 BMFQ96LC9 184 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 SCGB3A2Q96PL1 93 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 STMN4Q9H169 189 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-209ENST00000566240 SAV1Q9H4B6 383 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-209ENST00000566240 ARMC7Q9H6L4 198 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 MED4Q9NPJ6 270 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 ZNF331Q9NQX6 463 aaPredicted RBP3.32□□□□□ -1.88
CNOT1-209ENST00000566240 CTSFQ9UBX1 484 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 ASTN1O14525 1302 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 PIK3R4Q99570 1358 aa3.32□□□□□ -1.88
CNOT1-209ENST00000566240 VIRMAQ69YN4 1812 aaKnown RBP3.32□□□□□ -1.88
CNOT1-209ENST00000566240 CHD2O14647 1828 aaKnown RBP3.31□□□□□ -1.88
CNOT1-209ENST00000566240 USP54Q70EL1 1684 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 IQSEC2Q5JU85 1478 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 ANKARQ7Z5J8 1434 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 HACD1B0YJ81 288 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 NVLO15381 856 aaKnown RBP3.31□□□□□ -1.88
CNOT1-209ENST00000566240 CTSLP07711 333 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 CD37P11049 281 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 TCN2P20062 427 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 IVDP26440 423 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 ZNF133P52736 654 aaPredicted RBP3.31□□□□□ -1.88
CNOT1-209ENST00000566240 PSMC5P62195 406 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 ORMDL2Q53FV1 153 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 C6orf183Q5T699 404 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 CEMP1Q6PRD7 247 aaPredicted RBP3.31□□□□□ -1.88
CNOT1-209ENST00000566240 FAM86B1Q8N7N1 296 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 GATSQ8NAP1 163 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 OR10W1Q8NGF6 305 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 OR8K3Q8NH51 312 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 ZNF596Q8TC21 504 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 FAM131CQ96AQ9 280 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 DCPSQ96C86 337 aaKnown RBP3.31□□□□□ -1.88
CNOT1-209ENST00000566240 TM4SF18Q96CE8 201 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 RCN3Q96D15 328 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 CHID1Q9BWS9 393 aa3.31□□□□□ -1.88
CNOT1-209ENST00000566240 SLIRPQ9GZT3 109 aaKnown RBP3.31□□□□□ -1.88
CNOT1-209ENST00000566240 LTN1O94822 1766 aa3.3□□□□□ -1.88
CNOT1-209ENST00000566240 NWD1Q149M9 1564 aa3.3□□□□□ -1.88
CNOT1-209ENST00000566240 PCDH11XQ9BZA7 1347 aa3.3□□□□□ -1.88
CNOT1-209ENST00000566240 IGHV5-51A0A0C4DH38 117 aa3.3□□□□□ -1.88
CNOT1-209ENST00000566240 A0A0J9YXV3 536 aa3.3□□□□□ -1.88
CNOT1-209ENST00000566240 LOC100506127A0A0U1RQW1 187 aa3.3□□□□□ -1.88
CNOT1-209ENST00000566240 A0A1B0GVY2 172 aa3.3□□□□□ -1.88
CNOT1-209ENST00000566240 ANKRD63C9JTQ0 380 aa3.3□□□□□ -1.88
CNOT1-209ENST00000566240 TMX2-CTNND1H3BSU7 103 aa3.3□□□□□ -1.88
CNOT1-209ENST00000566240 PSMD11O00231 422 aa3.3□□□□□ -1.88
CNOT1-209ENST00000566240 POLR1CO15160 346 aaPredicted RBP3.3□□□□□ -1.88
CNOT1-209ENST00000566240 ANGPTL7O43827 346 aa3.3□□□□□ -1.88
CNOT1-209ENST00000566240 GMDSO60547 372 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms