RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 SIRPB1O00241 398 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 SCAMP2O15127 329 aaKnown RBP1.85□□□□□ -2.11
PALB2-203ENST00000565038 EIF3HO15372 352 aaKnown RBP eCLIP1.85□□□□□ -2.11
PALB2-203ENST00000565038 PLIN3O60664 434 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 CNMDO75829 334 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 IL32P24001 234 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 PSMB5P28074 263 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 PBLDP30039 288 aaPredicted RBP1.85□□□□□ -2.11
PALB2-203ENST00000565038 SULT1E1P49888 294 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 TAS2R46P59540 309 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 SIGLEC14Q08ET2 396 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 XKR7Q5GH72 579 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 CCDC183Q5T5S1 534 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 TMEM136Q6ZRR5 245 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 OR4M1Q8NGD0 313 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 OR4A4PQ8NGN8 299 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 ZFP3Q96NJ6 502 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 TMEM243Q9BU79 118 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 ANKRA2Q9H9E1 313 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 BCL9LQ86UU0 1499 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 EHBP1L1Q8N3D4 1523 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 KDM5DQ9BY66 1539 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 ARHGEF5Q12774 1597 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 ROCK1Q13464 1354 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 ABCC11Q96J66 1382 aa1.85□□□□□ -2.11
PALB2-203ENST00000565038 PIK3C2BO00750 1634 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 MYO3AQ8NEV4 1616 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 PTPN23Q9H3S7 1636 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 ERBINQ96RT1 1412 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 SMCO3A2RU48 225 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 SERPINB7O75635 380 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 TROVE2P10155 538 aaKnown RBP eCLIP1.84□□□□□ -2.11
PALB2-203ENST00000565038 CSNK2A2P19784 350 aaPredicted RBP1.84□□□□□ -2.11
PALB2-203ENST00000565038 OR1E1P30953 314 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 RRM2P31350 389 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 POLR2IP36954 125 aaKnown RBP1.84□□□□□ -2.11
PALB2-203ENST00000565038 ATP5IP56385 69 aaPredicted RBP1.84□□□□□ -2.11
PALB2-203ENST00000565038 PPIDQ08752 370 aaKnown RBP1.84□□□□□ -2.11
PALB2-203ENST00000565038 ART3Q13508 389 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 TRAM2Q15035 370 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 KRTAP6-3Q3LI67 103 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 HSP90AB3PQ58FF7 597 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 STUMQ69YW2 141 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 C22orf42Q6IC83 251 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 H3F3CQ6NXT2 135 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 OR10G6Q8NH81 332 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 RAB3IL1Q8TBN0 382 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 ELMO1Q92556 727 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 CPNE4Q96A23 557 aaPredicted RBP1.84□□□□□ -2.11
PALB2-203ENST00000565038 CHCHD7Q9BUK0 85 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 SLIRPQ9GZT3 109 aaKnown RBP1.84□□□□□ -2.11
PALB2-203ENST00000565038 PITPNC1Q9UKF7 332 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 MAP3K1Q13233 1512 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 EFCAB6Q5THR3 1501 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 LMTK2Q8IWU2 1503 aa1.84□□□□□ -2.11
PALB2-203ENST00000565038 PCDH11XQ9BZA7 1347 aa1.84□□□□□ -2.12
PALB2-203ENST00000565038 MAST1Q9Y2H9 1570 aa1.84□□□□□ -2.12
PALB2-203ENST00000565038 LRPPRCP42704 1394 aaKnown RBP1.84□□□□□ -2.12
PALB2-203ENST00000565038 PIK3R4Q99570 1358 aa1.84□□□□□ -2.12
PALB2-203ENST00000565038 RGS12O14924 1447 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 ATRNO75882 1429 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 SETD5Q9C0A6 1442 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 NCOA3Q9Y6Q9 1424 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 ADGRL2O95490 1459 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 XKRY2A2RUG3 117 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 MANBAO00462 879 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 LSM1O15116 133 aaKnown RBP1.83□□□□□ -2.12
PALB2-203ENST00000565038 RNF13O43567 381 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 NMT2O60551 498 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 CIB2O75838 187 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 AQP8O94778 261 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 LHBP01229 141 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 SYKP43405 635 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 NDUFA8P51970 172 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 CMC4P56277 68 aaPredicted RBP1.83□□□□□ -2.12
PALB2-203ENST00000565038 PNOCQ13519 176 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 FAM53BQ14153 422 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 PGGHGQ32M88 737 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 KLHL12Q53G59 568 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 C16orf47Q6ZP98 133 aaPredicted RBP1.83□□□□□ -2.12
PALB2-203ENST00000565038 TAS2R42Q7RTR8 314 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 CBLN2Q8IUK8 224 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 ZNF664Q8N3J9 261 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 OR6Q1Q8NGQ2 317 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 LYPD6BQ8NI32 183 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 GHSRQ92847 366 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 NRBF2Q96F24 287 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 MARVELD1Q9BSK0 173 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 BEX1Q9HBH7 125 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 SLC17A4Q9Y2C5 497 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 TMEM131LA2VDJ0 1609 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 ADGBQ8N7X0 1667 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 RAB3GAP2Q9H2M9 1393 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 UBR1Q8IWV7 1749 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 SPATA31E1Q6ZUB1 1445 aa1.83□□□□□ -2.12
PALB2-203ENST00000565038 YTHDC2Q9H6S0 1430 aaKnown RBP1.83□□□□□ -2.12
PALB2-203ENST00000565038 ANKRD12Q6UB98 2062 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 XIRP1Q702N8 1843 aaKnown RBP1.82□□□□□ -2.12
PALB2-203ENST00000565038 SETBP1Q9Y6X0 1596 aa1.82□□□□□ -2.12
PALB2-203ENST00000565038 DEPDC5O75140 1603 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms