RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CLN6Q9NWW5 311 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 STX18Q9P2W9 335 aaKnown RBP2.15□□□□□ -2.07
UBR1-205ENST00000564540 SCN1AP35498 2009 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 IGLV1-50A0A075B6I6 118 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 SMKR1H3BMG3 65 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 XRCC2O43543 280 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 SC5DO75845 299 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 AQP8O94778 261 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 PLEKHA8P1O95397 391 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 BRI3O95415 125 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 TDP2O95551 362 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 OR56A5P0C7T3 313 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 CT45A6P0DMU7 189 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 CT45A5P0DMU8 189 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 CT45A7P0DMV0 189 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 IL32P24001 234 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 IVDP26440 423 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 HTR2CP28335 458 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 IL12BP29460 328 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 TPM4P67936 248 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 COTL1Q14019 142 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 IGFBP7Q16270 282 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 PSMD5Q16401 504 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 CT45A1Q5HYN5 189 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 TPRG1LQ5T0D9 272 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 CCDC122Q5T0U0 273 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 ZNF470Q6ECI4 717 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 PRMT9Q6P2P2 845 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 TMEM179Q6ZVK1 233 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 OR2W3Q7Z3T1 314 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 CBLN2Q8IUK8 224 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 KIF2BQ8N4N8 673 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 OR10R2Q8NGX6 335 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 OR4S2Q8NH73 311 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 CT45A3Q8NHU0 189 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 CCDC12Q8WUD4 166 aaPredicted RBP2.14□□□□□ -2.07
UBR1-205ENST00000564540 RPEQ96AT9 228 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 NARS2Q96I59 477 aaKnown RBP2.14□□□□□ -2.07
UBR1-205ENST00000564540 RNF170Q96K19 258 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 CYTH2Q99418 400 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 DOK1Q99704 481 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 GOLPH3Q9H4A6 298 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 WFDC1Q9HC57 220 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 ANKHQ9HCJ1 492 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 MS4A12Q9NXJ0 267 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 UBAP1Q9NZ09 502 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 GOLT1BQ9Y3E0 138 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 PTPRTO14522 1441 aa2.14□□□□□ -2.07
UBR1-205ENST00000564540 COL22A1Q8NFW1 1626 aaPredicted RBP2.13□□□□□ -2.07
UBR1-205ENST00000564540 JCADQ9P266 1359 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 A0A1B0GW15 77 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 A0A1W2PRF3 423 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 A0A1W2PRM7 423 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 TRPC5OSA6NMA1 111 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 NCBP2LA6PVI3 153 aaKnown RBP2.13□□□□□ -2.07
UBR1-205ENST00000564540 LYRM9A8MSI8 78 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 H3BN98 237 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 ERI3O43414 337 aaKnown RBP2.13□□□□□ -2.07
UBR1-205ENST00000564540 DPM1O60762 260 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 FKBP6O75344 327 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 MPDU1O75352 247 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 CDK14O94921 469 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 UTS2O95399 124 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 LSM8O95777 96 aaKnown RBP2.13□□□□□ -2.07
UBR1-205ENST00000564540 CST4P01036 141 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 CATP04040 527 aaKnown RBP2.13□□□□□ -2.07
UBR1-205ENST00000564540 HLA-DPB1P04440 258 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 IL4P05112 153 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 BGNP21810 368 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 DEKP35659 375 aaKnown RBP2.13□□□□□ -2.07
UBR1-205ENST00000564540 GPX4P36969 197 aaPredicted RBP2.13□□□□□ -2.07
UBR1-205ENST00000564540 SERPINB8P50452 374 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 UGT2B15P54855 530 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 CLDN6P56747 220 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 ARG2P78540 354 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 STX3Q13277 289 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 SLC39A6Q13433 755 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 NDUFAF6Q330K2 333 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 APOBEC3HQ6NTF7 200 aaKnown RBP2.13□□□□□ -2.07
UBR1-205ENST00000564540 TMPRSS11AQ6ZMR5 421 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 TMEM135Q86UB9 458 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 ZFP41Q8N8Y5 198 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 CYB561A3Q8NBI2 242 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 NOXO1Q8NFA2 376 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 ITFG1Q8TB96 612 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 ABHD3Q8WU67 409 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 OR8D1Q8WZ84 308 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 EEF1AKMT3Q96AZ1 226 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 CATSPER2Q96P56 530 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 NAPGQ99747 312 aaPredicted RBP2.13□□□□□ -2.07
UBR1-205ENST00000564540 TIMM29Q9BSF4 260 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 C1orf198Q9H425 327 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 RPF2Q9H7B2 306 aaKnown RBP2.13□□□□□ -2.07
UBR1-205ENST00000564540 UBE2ZQ9H832 354 aaPredicted RBP2.13□□□□□ -2.07
UBR1-205ENST00000564540 PARVGQ9HBI0 331 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 EURLQ9NYK6 297 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 CLEC2DQ9UHP7 191 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 MRM2Q9UI43 246 aaKnown RBP2.13□□□□□ -2.07
UBR1-205ENST00000564540 V9GYY9 64 aa2.13□□□□□ -2.07
UBR1-205ENST00000564540 MROH7Q68CQ1 1323 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms