RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 TRAV36DV7A0A075B6V5 113 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 SHISA3A0PJX4 238 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 LRRN3E7EW58 273 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 LGALS9O00182 355 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 SDHDO14521 159 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 OR2T1O43869 369 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 IGLV1-51P01701 117 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 HLA-DPB1P04440 258 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 OR8U9P0C7N5 309 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 ZCCHC18P0CG32 403 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 LBPP18428 481 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 COX7A1P24310 79 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 TGM4P49221 684 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 CRISP3P54108 245 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 NME5P56597 212 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 COPZ1P61923 177 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 TNP2Q05952 138 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 XP32Q5T750 250 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 ZNF621Q6ZSS3 439 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 WFDC3Q8IUB2 231 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 GCSAMQ8N6F7 178 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 OR1N2Q8NGR9 330 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 AENQ8WTP8 325 aaKnown RBP8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 UBLCP1Q8WVY7 318 aaPredicted RBP8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 SLC38A4Q969I6 547 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 ZNF582Q96NG8 517 aaPredicted RBP8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 OR52E6Q96RD3 313 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 P2RX2Q9UBL9 471 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 STARD10Q9Y365 291 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 RAP2CQ9Y3L5 183 aa8.08□□□□□ -1.12
HDGFL3-204ENST00000563790 IGHV3OR15-7A0A075B7D8 119 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 A0A0G2JPF8 293 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 ODF3BA8MYP8 253 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 HNRNPCL2B2RXH8 293 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 HNRNPCL3B7ZW38 293 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 M0QZK8 103 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 PLPP3O14495 311 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 TPST1O60507 370 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 HNRNPCL1O60812 293 aaKnown RBP8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 PTBP3O95758 552 aaKnown RBP8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 ELANEP08246 267 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 HNRNPCL4P0DMR1 293 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 FPR3P25089 353 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 DSTNP60981 165 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 ABCE1P61221 599 aaKnown RBP8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 PUDPQ08623 228 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 MPP2Q14168 576 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 OR2T2Q6IF00 324 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 C5orf46Q6UWT4 87 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 NET1Q7Z628 596 aaPredicted RBP8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 PXKQ7Z7A4 578 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 GTSCR1Q86UQ5 136 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 HAPLN4Q86UW8 402 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 TRIML2Q8N7C3 387 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 CLDN22Q8N7P3 220 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 MAL2Q969L2 176 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 MCHR2Q969V1 340 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 NUF2Q9BZD4 464 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 KCNN2Q9H2S1 579 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 TPT1P8Q9HAU6 139 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 TPSG1Q9NRR2 321 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 MRPL39Q9NYK5 338 aaKnown RBP8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 CALML5Q9NZT1 146 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 LINC00527Q9UJ94 153 aa8.07□□□□□ -1.12
HDGFL3-204ENST00000563790 A0A0B4J2E0 115 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 A0A1B0GX12 115 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 TLDC2A0PJX2 215 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 LYPD3O95274 346 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 KRT75O95678 551 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 IGHG1P01857 330 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 MUC1P15941 1255 aaPredicted RBP8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 ASIPP42127 132 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 RPL14P50914 215 aaKnown RBP8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 OR12D2P58182 307 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 SLC34A1Q06495 639 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 FOXE3Q13461 319 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 TRIM25Q14258 630 aaKnown RBP8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 HIST3H3Q16695 136 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 FBXW12Q6X9E4 464 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 LINC00114Q6XXX2 140 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 MSRB3Q8IXL7 192 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 ALDH16A1Q8IZ83 802 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 POM121L12Q8N7R1 296 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 OR5K1Q8NHB7 308 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 ACOT11Q8WXI4 607 aaPredicted RBP8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 ARPC1AQ92747 370 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 DLX4Q92988 240 aaPredicted RBP8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 COG8Q96MW5 612 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 OR4C12Q96R67 309 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 SEPHS2Q99611 448 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 CPPED1Q9BRF8 314 aaPredicted RBP8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 HCAR1Q9BXC0 346 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 WNT5BQ9H1J7 359 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 RABEP2Q9H5N1 569 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 TMEM100Q9NV29 134 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 PNPOQ9NVS9 261 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 TAS2R5Q9NYW4 299 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 DNAJB9Q9UBS3 223 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 IFT52Q9Y366 437 aa8.06□□□□□ -1.12
HDGFL3-204ENST00000563790 TNXBP22105 4242 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms