RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 KCTD14Q9BQ13 255 aaPredicted RBP8.41□□□□□ -1.06
SF3B3-204ENST00000563739 DCTN5Q9BTE1 182 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 WNT10AQ9GZT5 417 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 NUAK2Q9H093 628 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 HDHD2Q9H0R4 259 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 RANBP3Q9H6Z4 567 aaPredicted RBP8.41□□□□□ -1.06
SF3B3-204ENST00000563739 C1orf123Q9NWV4 160 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 NDE1Q9NXR1 346 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 KIF17Q9P2E2 1029 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 ONECUT1Q9UBC0 465 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 RHCGQ9UBD6 479 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 HERC2O95714 4834 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 CD300LBA8K4G0 201 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 SLC16A7O60669 478 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 ECDO95905 644 aaPredicted RBP8.4□□□□□ -1.06
SF3B3-204ENST00000563739 VSIG10L2P0DP72 767 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 IRF2P14316 349 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 CDKN2AP42771 156 aaKnown RBP8.4□□□□□ -1.06
SF3B3-204ENST00000563739 GPR4P46093 362 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 TGM4P49221 684 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 CSNK2BP67870 215 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 MXRA7P84157 204 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 ZNF92Q03936 586 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 OR8B8Q15620 311 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 C11orf91Q3C1V1 193 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 LRRC23Q53EV4 343 aaPredicted RBP8.4□□□□□ -1.06
SF3B3-204ENST00000563739 STUMQ69YW2 141 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 SLC18B1Q6NT16 456 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 C16orf89Q6UX73 402 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 LINC00346Q8IVM7 164 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 GLB1L2Q8IW92 636 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 DYNAPQ8N1N2 210 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 SLC26A10Q8NG04 563 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 RASSF5Q8WWW0 418 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 SLCO4A1Q96BD0 722 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 R3HDM4Q96D70 268 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 ZNF570Q96NI8 536 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 GPX7Q96SL4 187 aaPredicted RBP8.4□□□□□ -1.06
SF3B3-204ENST00000563739 BTBD10Q9BSF8 475 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 FGF23Q9GZV9 251 aaPredicted RBP8.4□□□□□ -1.06
SF3B3-204ENST00000563739 FN3KRPQ9HA64 309 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 NRIP3Q9NQ35 241 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 RPS6KA6Q9UK32 745 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 PRPF19Q9UMS4 504 aaKnown RBP8.4□□□□□ -1.06
SF3B3-204ENST00000563739 FAM96BQ9Y3D0 163 aa8.4□□□□□ -1.06
SF3B3-204ENST00000563739 TRAV38-1A0A0B4J264 116 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 MEIOCA2RUB1 952 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 ANKRD61A6NGH8 418 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 CXCR6O00574 342 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 PTP4A3O75365 173 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 FBXO24O75426 580 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 KHDRBS3O75525 346 aaKnown RBP8.39□□□□□ -1.07
SF3B3-204ENST00000563739 OTX1P32242 354 aaPredicted RBP8.39□□□□□ -1.07
SF3B3-204ENST00000563739 KDELR2P33947 212 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 GGT2P36268 569 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 RPL4P36578 427 aaKnown RBP8.39□□□□□ -1.07
SF3B3-204ENST00000563739 UBE2E1P51965 193 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 TRAP1Q12931 704 aaKnown RBP8.39□□□□□ -1.07
SF3B3-204ENST00000563739 RIPK1Q13546 671 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 OR8G1Q15617 311 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 TMEM95Q3KNT9 176 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 CYBRD1Q53TN4 286 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 TCTEX1D4Q5JR98 221 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 SAMD4BQ5PRF9 694 aaKnown RBP8.39□□□□□ -1.07
SF3B3-204ENST00000563739 LDLRAD2Q5SZI1 272 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 OAFQ86UD1 273 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 NDUFA11Q86Y39 141 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 DEFB107AQ8IZN7 70 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 RNF148Q8N7C7 305 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 PLPP7Q8NBV4 271 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 PAPD5Q8NDF8 572 aaKnown RBP8.39□□□□□ -1.07
SF3B3-204ENST00000563739 OR5L1Q8NGL2 311 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 OR4C13Q8NGP0 309 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 SLC26A7Q8TE54 656 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 UTP4Q969X6 686 aaKnown RBP8.39□□□□□ -1.07
SF3B3-204ENST00000563739 MAP6Q96JE9 813 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 GAFA1Q96PS6 74 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 SSX3Q99909 188 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 B9D2Q9BPU9 175 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 MEGF9Q9H1U4 602 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 TRIM36Q9NQ86 728 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 TAS2R1Q9NYW7 299 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 SIGLEC7Q9Y286 467 aa8.39□□□□□ -1.07
SF3B3-204ENST00000563739 DSCAML1Q8TD84 2053 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 BTBD17A6NE02 478 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 EFCAB9A8MZ26 197 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 B2RBV5 119 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 GSTA4O15217 222 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 GYG2O15488 501 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 GSC2O15499 205 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 NDUFA2O43678 99 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 AHCYL1O43865 530 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 TXNDC12O95881 172 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 IFNA14P01570 189 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 HSD17B1P14061 328 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 SDHAP31040 664 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 MSX2P35548 267 aaPredicted RBP8.38□□□□□ -1.07
SF3B3-204ENST00000563739 YAP1P46937 504 aaKnown RBP8.38□□□□□ -1.07
SF3B3-204ENST00000563739 BMXP51813 675 aa8.38□□□□□ -1.07
SF3B3-204ENST00000563739 EGFEM1PQ0D2K5 195 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms