RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 OPN3Q9H1Y3 402 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-208ENST00000563220 PLEKHA1Q9HB21 404 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 PIGLQ9Y2B2 252 aa15.67■□□□□ 0.1
COMMD4-208ENST00000563220 MAP1BP46821 2468 aaKnown RBP15.66■□□□□ 0.1
COMMD4-208ENST00000563220 IGKV1-9A0A0C4DH69 117 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 A0A1W2PR80 420 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 CIB4A0PJX0 185 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 SULT1B1O43704 296 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 MTRF1O75570 445 aaKnown RBP15.66■□□□□ 0.1
COMMD4-208ENST00000563220 FAHP16930 419 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 ACKR3P25106 362 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 POU3F4P49335 361 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 ZNF92Q03936 586 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 DMRTC1Q5HYR2 192 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 PGAP1Q75T13 922 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 Q8N402 240 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 OR4D6Q8NGJ1 314 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 ABCG5Q9H222 651 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 ASF1BQ9NVP2 202 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 PROCRQ9UNN8 238 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 ETV7Q9Y603 341 aa15.66■□□□□ 0.1
COMMD4-208ENST00000563220 COX5AP20674 150 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 TIMP3P35625 211 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 EFNB2P52799 333 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 PLP2Q04941 152 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 NCCRP1Q6ZVX7 275 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-208ENST00000563220 IZUMO1Q8IYV9 350 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 CCDC54Q8NEL0 328 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 OR6M1Q8NGM8 313 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 NANOS1Q8WY41 292 aaKnown RBP15.65■□□□□ 0.1
COMMD4-208ENST00000563220 FOXRED1Q96CU9 486 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-208ENST00000563220 CNTD2Q9H8S5 307 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 A0A1W2PQ09 198 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 IL2RAP01589 272 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 CRHP06850 196 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 THBS4P35443 961 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 ART1P52961 327 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 SCAND1P57086 179 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 UBE2V2Q15819 145 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 AGAP6Q5VW22 663 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 DOLPP1Q86YN1 238 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 ZCCHC14Q8WYQ9 949 aaKnown RBP15.65■□□□□ 0.1
COMMD4-208ENST00000563220 HAVCR1Q96D42 359 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 SPACA5Q96QH8 159 aa15.65■□□□□ 0.1
COMMD4-208ENST00000563220 LOC100289279A0A1B0GTE1 492 aa15.64■□□□□ 0.09
COMMD4-208ENST00000563220 TMEM272A0A1B0GTI8 110 aa15.64■□□□□ 0.09
COMMD4-208ENST00000563220 HOXD4P09016 255 aaPredicted RBP15.64■□□□□ 0.09
COMMD4-208ENST00000563220 FAM3AP98173 230 aa15.64■□□□□ 0.09
COMMD4-208ENST00000563220 GFRALQ6UXV0 394 aa15.64■□□□□ 0.09
COMMD4-208ENST00000563220 BIVMQ86UB2 503 aa15.64■□□□□ 0.09
COMMD4-208ENST00000563220 PAQR4Q8N4S7 273 aaPredicted RBP15.64■□□□□ 0.09
COMMD4-208ENST00000563220 SEMA6DQ8NFY4 1073 aa15.64■□□□□ 0.09
COMMD4-208ENST00000563220 SORCS2Q96PQ0 1159 aa15.64■□□□□ 0.09
COMMD4-208ENST00000563220 METTL17Q9H7H0 456 aaPredicted RBP15.64■□□□□ 0.09
COMMD4-208ENST00000563220 MRPS7Q9Y2R9 242 aaKnown RBP15.64■□□□□ 0.09
COMMD4-208ENST00000563220 hCG_38984A0A1B0GV85 526 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 SERPINA5P05154 406 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 GLI4P10075 376 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 HOXD11P31277 338 aaPredicted RBP15.63■□□□□ 0.09
COMMD4-208ENST00000563220 CEACAM8P31997 349 aaPredicted RBP15.63■□□□□ 0.09
COMMD4-208ENST00000563220 GSK3AP49840 483 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 UBE2NP61088 152 aaKnown RBP15.63■□□□□ 0.09
COMMD4-208ENST00000563220 SCN1BQ07699 218 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 ASAH1Q13510 395 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 TAB1Q15750 504 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 PYHIN1Q6K0P9 492 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 CXorf67Q86X51 503 aaPredicted RBP15.63■□□□□ 0.09
COMMD4-208ENST00000563220 SSC4DQ8WTU2 575 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 RAB40AQ8WXH6 277 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 SPSB4Q96A44 273 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 C10orf35Q96D05 121 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 BOD1Q96IK1 185 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 CHST5Q9GZS9 411 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 RGCCQ9H4X1 137 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 ZNF391Q9UJN7 358 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 DHRS7CA6NNS2 312 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 PRRG2O14669 202 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 XRCC2O43543 280 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 NGFP01138 241 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 ERCC1P07992 297 aaPredicted RBP15.63■□□□□ 0.09
COMMD4-208ENST00000563220 ARSBP15848 533 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 APLNRP35414 380 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 ZNF93P35789 620 aaPredicted RBP15.63■□□□□ 0.09
COMMD4-208ENST00000563220 RIPPLY1Q0D2K3 151 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 UTS2BQ765I0 119 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 MYPOPQ86VE0 399 aaPredicted RBP15.63■□□□□ 0.09
COMMD4-208ENST00000563220 CCDC36Q8IYA8 594 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 WDR31Q8NA23 367 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 PP6455Q8WZ26 134 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 FAM122AQ96E09 287 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 S100A16Q96FQ6 103 aaKnown RBP15.63■□□□□ 0.09
COMMD4-208ENST00000563220 UQCC2Q9BRT2 126 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 MYEF2Q9P2K5 600 aaKnown RBP15.63■□□□□ 0.09
COMMD4-208ENST00000563220 ZNF835Q9Y2P0 537 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 STARD10Q9Y365 291 aa15.63■□□□□ 0.09
COMMD4-208ENST00000563220 LINC00854A0A1B0GVQ3 168 aa15.62■□□□□ 0.09
COMMD4-208ENST00000563220 LDLRAD4O15165 306 aa15.62■□□□□ 0.09
COMMD4-208ENST00000563220 ALDOBP05062 364 aa15.62■□□□□ 0.09
COMMD4-208ENST00000563220 CELA3BP08861 270 aa15.62■□□□□ 0.09
COMMD4-208ENST00000563220 ZNF14P17017 642 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms