RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 GALEQ14376 348 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 NKPD1Q17RQ9 610 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 SNAI3Q3KNW1 292 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 CDONQ4KMG0 1287 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 ZMAT1Q5H9K5 638 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 C6orf141Q5SZD1 244 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 PGAP1Q75T13 922 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 FAM220AQ7Z4H9 259 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 ZNF540Q8NDQ6 660 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 CLDND2Q8NHS1 167 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 HAVCR2Q8TDQ0 301 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 SPSB4Q96A44 273 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 CMBLQ96DG6 245 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 PGAM5Q96HS1 289 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 C19orf24Q9BVV8 132 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 PTTG3PQ9NZH4 202 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 TAAR3PQ9P1P4 343 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 MRM2Q9UI43 246 aaKnown RBP13.3□□□□□ -0.28
USB1-208ENST00000563207 A0A0U1RQV5 110 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 PLSCR5A0PG75 271 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 PRR32B1ATL7 298 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 FAM157AC9JC47 383 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 PSMD9O00233 223 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 MPV17P39210 176 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 DDOSTP39656 456 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 CDH15P55291 814 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 MRPL28Q13084 256 aaKnown RBP13.29□□□□□ -0.28
USB1-208ENST00000563207 GK2Q14410 553 aaPredicted RBP13.29□□□□□ -0.28
USB1-208ENST00000563207 TIGD6Q17RP2 521 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 FAM57BQ71RH2 274 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 SSX6Q7RTT6 188 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 MRPL21Q7Z2W9 205 aaKnown RBP13.29□□□□□ -0.28
USB1-208ENST00000563207 SYS1Q8N2H4 156 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 RFLNBQ8N5W9 214 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 YIPF7Q8N8F6 280 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 LINC01356Q8N9X3 169 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 TMEM80Q96HE8 168 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 DIRC2Q96SL1 478 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 POFUT1Q9H488 388 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 LPAR2Q9HBW0 351 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 ZNF275Q9NSD4 429 aaPredicted RBP13.29□□□□□ -0.28
USB1-208ENST00000563207 FAM206AQ9NX38 181 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 SCN3BQ9NY72 215 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 TREM2Q9NZC2 230 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 NUFIP1Q9UHK0 495 aaKnown RBP13.29□□□□□ -0.28
USB1-208ENST00000563207 PSORS1C1Q9UIG5 152 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 PURGQ9UJV8 347 aaKnown RBP13.29□□□□□ -0.28
USB1-208ENST00000563207 DIMT1Q9UNQ2 313 aaKnown RBP13.29□□□□□ -0.28
USB1-208ENST00000563207 MYRFQ9Y2G1 1151 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 EXOSC1Q9Y3B2 195 aaKnown RBP13.29□□□□□ -0.28
USB1-208ENST00000563207 SNX5Q9Y5X3 404 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 R4GMQ9 66 aa13.29□□□□□ -0.28
USB1-208ENST00000563207 IQCF6A8MYZ5 107 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 TBX1O43435 398 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 DENRO43583 198 aaKnown RBP13.28□□□□□ -0.28
USB1-208ENST00000563207 TIMM8AO60220 97 aaPredicted RBP13.28□□□□□ -0.28
USB1-208ENST00000563207 CDC14BO60729 498 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 FAM20BO75063 409 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 RP2O75695 350 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 CCDC159P0C7I6 412 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 SLC2A1P11166 492 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 MYL12AP19105 171 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 CCL8P80075 99 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 PCGF3Q3KNV8 242 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 LIPNQ5VXI9 398 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 LAIR2Q6ISS4 152 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 BPIFB6Q8NFQ5 453 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 GGHQ92820 318 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 HPS1Q92902 700 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 ALG8Q9BVK2 526 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 TTTY10Q9BZA0 68 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 BRD7Q9NPI1 651 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 CHCHD3Q9NX63 227 aaKnown RBP13.28□□□□□ -0.28
USB1-208ENST00000563207 ERVK13-1Q9NX77 482 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 NKIRAS2Q9NYR9 191 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 ZDHHC8Q9ULC8 765 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 CACNG2Q9Y698 323 aa13.28□□□□□ -0.28
USB1-208ENST00000563207 C17orf100A8MU93 164 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 LOC110117498-PIK3R3F6TDL0 507 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 SLC1A7O00341 560 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 SRSF10O75494 262 aaKnown RBP13.27□□□□□ -0.29
USB1-208ENST00000563207 ADH4P08319 380 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 RPSAP08865 295 aaKnown RBP13.27□□□□□ -0.29
USB1-208ENST00000563207 ATP6V1B1P15313 513 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 GPR6P46095 362 aaPredicted RBP13.27□□□□□ -0.29
USB1-208ENST00000563207 MMP15P51511 669 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 ZNF92Q03936 586 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 ST3GAL4Q11206 333 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 HLXQ14774 488 aaPredicted RBP13.27□□□□□ -0.29
USB1-208ENST00000563207 FAM209AQ5JX71 171 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 GLYATL3Q5SZD4 288 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 AVPI1Q5T686 147 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 LHFPL3Q86UP9 236 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 OR8G5Q8NG78 346 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 RDH5Q92781 318 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 SGK3Q96BR1 496 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 REEP6Q96HR9 211 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 ZNF649Q9BS31 505 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 PBOV1Q9GZY1 135 aa13.27□□□□□ -0.29
USB1-208ENST00000563207 SLC22A4Q9H015 551 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms