RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SOX7Q9BT81 388 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 ACOXLQ9NUZ1 547 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 OR52A1Q9UKL2 312 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 IKZF2Q9UKS7 526 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 RAB26Q9ULW5 256 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 DYSFO75923 2080 aa11.38□□□□□ -0.59
CDH1-204ENST00000562118 DAPL1A0PJW8 107 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 LOC110117498-PIK3R3F6TDL0 507 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 GMDSO60547 372 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 FSTL3O95633 263 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 CST4P01036 141 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 ISG15P05161 165 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 FOSL1P15407 271 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 SLC25A16P16260 332 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 ATP6V1E1P36543 226 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 PDLIM4P50479 330 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 OR12D2P58182 307 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 CSNK2BP67870 215 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 MRPL28Q13084 256 aaKnown RBP11.37□□□□□ -0.59
CDH1-204ENST00000562118 MAB21L1Q13394 359 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 SNCBQ16143 134 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 TIGD6Q17RP2 521 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 ZNF181Q2M3W8 571 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 TMEM42Q69YG0 159 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 CLEC2AQ6UVW9 174 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 CSNK2A3Q8NEV1 391 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 ELMOD3Q96FG2 381 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 ALG8Q9BVK2 526 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 RASSF4Q9H2L5 321 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 CHODLQ9H9P2 273 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 SAP30LQ9HAJ7 183 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 TMEM100Q9NV29 134 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 NOP16Q9Y3C1 178 aaKnown RBP11.37□□□□□ -0.59
CDH1-204ENST00000562118 V9GYS6 101 aa11.37□□□□□ -0.59
CDH1-204ENST00000562118 NSD1Q96L73 2696 aaPredicted RBP11.37□□□□□ -0.59
CDH1-204ENST00000562118 EFCAB10A6NFE3 127 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 TRIM64A6NGJ6 449 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 TRIM64BA6NI03 449 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 H0YL77 283 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 TBX1O43435 398 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 SPRY3O43610 288 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 DHRS3O75911 302 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 TACSTD2P09758 323 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 COL8A2P25067 703 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 KIR3DL2P43630 455 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 TGM4P49221 684 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 ETV1P50549 477 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 PRSS12P56730 875 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 NANOS3P60323 173 aaKnown RBP11.36□□□□□ -0.59
CDH1-204ENST00000562118 CCL8P80075 99 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 TP53I3Q53FA7 332 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 WDR38Q5JTN6 314 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 C6orf141Q5SZD1 244 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 OR5AS1Q8N127 324 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 YIPF7Q8N8F6 280 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 CCDC54Q8NEL0 328 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 OR2G2Q8NGZ5 317 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 Q8TCH9 128 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 FAM168AQ92567 244 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 PPP1R14AQ96A00 147 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 MEGF10Q96KG7 1140 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 C4orf36Q96KX1 117 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 ISG20L2Q9H9L3 353 aaKnown RBP11.36□□□□□ -0.59
CDH1-204ENST00000562118 BRD7Q9NPI1 651 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 GPR84Q9NQS5 396 aa11.36□□□□□ -0.59
CDH1-204ENST00000562118 CAB39Q9Y376 341 aaPredicted RBP11.36□□□□□ -0.59
CDH1-204ENST00000562118 ANK3Q12955 4377 aaKnown RBP11.35□□□□□ -0.59
CDH1-204ENST00000562118 IGHV1-69-2A0A0G2JMI3 117 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 GGT3PA6NGU5 568 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 OR4C45A6NMZ5 311 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 SLC1A7O00341 560 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 XPNPEP2O43895 674 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 CCDC159P0C7I6 412 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 NR4A2P43354 598 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 TMEM33P57088 247 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 SLC35A2P78381 396 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 TNFAIP6P98066 277 aaPredicted RBP11.35□□□□□ -0.59
CDH1-204ENST00000562118 MVKQ03426 396 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 LOXL1Q08397 574 aaPredicted RBP11.35□□□□□ -0.59
CDH1-204ENST00000562118 FAM76BQ5HYJ3 339 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 BCL2L15Q5TBC7 163 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 FAM220AQ7Z4H9 259 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 LHFPL3Q86UP9 236 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 CIARTQ8N365 385 aaPredicted RBP11.35□□□□□ -0.59
CDH1-204ENST00000562118 SPERTQ8NA61 448 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 BHLHE23Q8NDY6 225 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 OR2Z1Q8NG97 314 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 OR10AD1Q8NGE0 317 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 OR14K1Q8NGZ2 314 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 OR52N1Q8NH53 320 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 OR51E1Q8TCB6 317 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 SPRYD4Q8WW59 207 aaPredicted RBP11.35□□□□□ -0.59
CDH1-204ENST00000562118 ERGIC1Q969X5 290 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 ITPKCQ96DU7 683 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 MRPL48Q96GC5 212 aaKnown RBP11.35□□□□□ -0.59
CDH1-204ENST00000562118 TMEM80Q96HE8 168 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 OR2V2Q96R30 315 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 ZNF184Q99676 751 aaPredicted RBP11.35□□□□□ -0.59
CDH1-204ENST00000562118 EGLN1Q9GZT9 426 aa11.35□□□□□ -0.59
CDH1-204ENST00000562118 FGF23Q9GZV9 251 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms