RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 LHX3Q9UBR4 397 aa6.48□□□□□ -1.37
CDH1-203ENST00000561751 GPR132Q9UNW8 380 aa6.48□□□□□ -1.37
CDH1-203ENST00000561751 HS3ST3B1Q9Y662 390 aa6.48□□□□□ -1.37
CDH1-203ENST00000561751 CHD5Q8TDI0 1954 aa6.48□□□□□ -1.37
CDH1-203ENST00000561751 A0A1W2PPK0 400 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 MBLAC1A4D2B0 266 aaPredicted RBP6.47□□□□□ -1.37
CDH1-203ENST00000561751 ZNF705GA8MUZ8 300 aaPredicted RBP6.47□□□□□ -1.37
CDH1-203ENST00000561751 E5RGE8 158 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 CDC42EP2O14613 210 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 ZNF264O43296 627 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 TCF21O43680 179 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 NARSO43776 548 aaKnown RBP6.47□□□□□ -1.37
CDH1-203ENST00000561751 B4GALT2O60909 372 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 WDR1O75083 606 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 ZNF217O75362 1048 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 GJB3O75712 270 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 ABHD16AO95870 558 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 TGFB1P01137 390 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 IGLV1-40P01703 118 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 TYMSP04818 313 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 PTHLHP12272 177 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 TDGF1P13385 188 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 IRF2P14316 349 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 FOSL2P15408 326 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 DTYMKP23919 212 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 NOVA1P51513 510 aaKnown RBP6.47□□□□□ -1.37
CDH1-203ENST00000561751 MTCP1P56278 107 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 FAM3BP58499 235 aaPredicted RBP6.47□□□□□ -1.37
CDH1-203ENST00000561751 UBE2G2P60604 165 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 PAFAH1B2P68402 229 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 ZNF117Q03924 483 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 EGR3Q06889 387 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 TGIF1Q15583 401 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 TAF9Q16594 264 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 C1orf100Q5SVJ3 147 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 LEG1Q6P5S2 330 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 TPRG1Q6ZUI0 275 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 TCF24Q7RTU0 167 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 SLC16A9Q7RTY1 509 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 FAM220AQ7Z4H9 259 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 ZNF429Q86V71 674 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 MYPOPQ86VE0 399 aaPredicted RBP6.47□□□□□ -1.37
CDH1-203ENST00000561751 C20orf196Q8IYI0 205 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 GBGT1Q8N5D6 347 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 OR6K2Q8NGY2 324 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 OR2V1Q8NHB1 315 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 OR14C36Q8NHC7 312 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 SCAMP5Q8TAC9 235 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 TMEM170AQ8WVE7 144 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 TMEM239Q8WW34 195 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 RGP1Q92546 391 aaPredicted RBP6.47□□□□□ -1.37
CDH1-203ENST00000561751 CDS1Q92903 461 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 SLC35E1Q96K37 410 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 SPACA7Q96KW9 195 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 TECTBQ96PL2 329 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 GAL3ST4Q96RP7 486 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 P2RX4Q99571 388 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 PDCD1LG2Q9BQ51 273 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 PRSS27Q9BQR3 290 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 C16orf70Q9BSU1 422 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 MS4A8Q9BY19 250 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 NMNAT2Q9BZQ4 307 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 ATG10Q9H0Y0 220 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 RBKSQ9H477 322 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 SYNPO2LQ9H987 977 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 PELI2Q9HAT8 420 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 OR2S2Q9NQN1 319 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 P4HTMQ9NXG6 502 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 FBXO4Q9UKT5 387 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 RAB22AQ9UL26 194 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 ZNF346Q9UL40 294 aaKnown RBP6.47□□□□□ -1.37
CDH1-203ENST00000561751 SRPK3Q9UPE1 567 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 NSG2Q9Y328 171 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 MED31Q9Y3C7 131 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 PUS1Q9Y606 427 aaKnown RBP eCLIP6.47□□□□□ -1.37
CDH1-203ENST00000561751 TMEM14AQ9Y6G1 99 aa6.47□□□□□ -1.37
CDH1-203ENST00000561751 YLPM1P49750 1951 aaKnown RBP6.47□□□□□ -1.37
CDH1-203ENST00000561751 FRMPD3Q5JV73 1810 aa6.46□□□□□ -1.37
CDH1-203ENST00000561751 TRAV30A0A087WSZ9 112 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 TMEM265A0A087WTH1 108 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 C13orf42A0A1B0GVH6 325 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 MSGN1A6NI15 193 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 OR4C45A6NMZ5 311 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 PRRT4C9JH25 899 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 TMEM238C9JI98 176 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 F6UZH7 168 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 H3BRB1 525 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 K7N7A8 449 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 ETV2O00321 342 aaPredicted RBP6.46□□□□□ -1.38
CDH1-203ENST00000561751 CCSO14618 274 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 AGPAT2O15120 278 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 GPR137BO60478 399 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 ERAL1O75616 437 aaKnown RBP6.46□□□□□ -1.38
CDH1-203ENST00000561751 DEDDO75618 318 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 UPK3AO75631 287 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 LYPD3O95274 346 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 MBPP02686 304 aaPredicted RBP6.46□□□□□ -1.38
CDH1-203ENST00000561751 IFNA6P05013 189 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 RHOCP08134 193 aa6.46□□□□□ -1.38
CDH1-203ENST00000561751 NBEAP1P0C6P0 100 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms