RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 PCED1AQ9H1Q7 454 aa9.75□□□□□ -0.85
NEIL1-202ENST00000561643 RAB22AQ9UL26 194 aa9.75□□□□□ -0.85
NEIL1-202ENST00000561643 SRPK3Q9UPE1 567 aa9.75□□□□□ -0.85
NEIL1-202ENST00000561643 POLR1DQ9Y2S0 133 aa9.75□□□□□ -0.85
NEIL1-202ENST00000561643 TRBV11-1A0A0K0K1C0 115 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 LOC390937A0A1W2PQ73 354 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 C1orf196B1AJZ1 125 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 HLA-AP01891 365 aaKnown RBP9.74□□□□□ -0.85
NEIL1-202ENST00000561643 OPN1LWP04000 364 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 FBP1P09467 338 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 ZNF735P0CB33 412 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 COX5BP10606 129 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 CD37P11049 281 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 CD34P28906 385 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 MMP16P51512 607 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 ZNF41P51814 821 aaPredicted RBP9.74□□□□□ -0.85
NEIL1-202ENST00000561643 DHRS2Q13268 280 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 LIN54Q6MZP7 749 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 CDPF1Q6NVV7 123 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 UNQ6126/PRO20091Q6UXV3 157 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 ETV3LQ6ZN32 361 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 TRAPPC6BQ86SZ2 158 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 FJX1Q86VR8 437 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 OR52N4Q8NGI2 321 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 ASB13Q8WXK3 278 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 RSRP1Q9BUV0 290 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 PPP4R1LQ9P1A2 415 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 NCOR1O75376 2440 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 UBE2CO00762 179 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 CD74P04233 296 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 RAB6AP20340 208 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 SUMO3P55854 103 aaPredicted RBP9.74□□□□□ -0.85
NEIL1-202ENST00000561643 CXADRP78310 365 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 ACY1Q03154 408 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 MEF2DQ14814 521 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 LY6G6FQ5SQ64 297 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 RHBDD2Q6NTF9 364 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 WDSUB1Q8N9V3 476 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 OR13C8Q8NGS7 320 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 PTX4Q96A99 478 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 SEC61A2Q9H9S3 476 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 SEBOXQ9HB31 216 aaPredicted RBP9.74□□□□□ -0.85
NEIL1-202ENST00000561643 SERINC1Q9NRX5 453 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 ALKBH4Q9NXW9 302 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 SEMA5BQ9P283 1151 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 B3GALT5Q9Y2C3 310 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 FAM96BQ9Y3D0 163 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 LIPT2A6NK58 231 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 COLCA2A8K830 154 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 ZNF208O43345 1280 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 KCNAB3O43448 404 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 MBTPS2O43462 519 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 CLN5O75503 358 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 TTRP02766 147 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 ZNF44P15621 663 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 BCKDHBP21953 392 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 CD96P40200 585 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 WDR74Q6RFH5 385 aaPredicted RBP9.74□□□□□ -0.85
NEIL1-202ENST00000561643 ZNF813Q6ZN06 617 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 COMMD2Q86X83 199 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 OR13C9Q8NGT0 318 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 ADAT3Q96EY9 351 aaPredicted RBP9.74□□□□□ -0.85
NEIL1-202ENST00000561643 C14orf79Q96F83 325 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 LURAP1Q96LR2 239 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 PRRT1Q99946 306 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 PHF7Q9BWX1 381 aaPredicted RBP9.74□□□□□ -0.85
NEIL1-202ENST00000561643 PBOV1Q9GZY1 135 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 PTGES2Q9H7Z7 377 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 FAM206AQ9NX38 181 aa9.74□□□□□ -0.85
NEIL1-202ENST00000561643 ZNF107Q9UII5 783 aaPredicted RBP9.74□□□□□ -0.85
NEIL1-202ENST00000561643 TTC28Q96AY4 2481 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 ARID1AO14497 2285 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 CXorf65A6NEN9 183 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 NPIPB13A6NJU9 1138 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 NPIPB4C9JG80 1138 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 RAB27BO00194 218 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 BCAT2O15382 392 aaPredicted RBP9.73□□□□□ -0.85
NEIL1-202ENST00000561643 HSD11B1P28845 292 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 TGIF1Q15583 401 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 NKAIN1Q4KMZ8 207 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 C3orf33Q6P1S2 294 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 SLC22A24Q8N4F4 322 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 GVQW1Q8N7I0 195 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 SLC38A9Q8NBW4 561 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 NUDCD2Q8WVJ2 157 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 AQP3Q92482 292 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 ZBTB8AQ96BR9 441 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 ZC3H10Q96K80 434 aaKnown RBP9.73□□□□□ -0.85
NEIL1-202ENST00000561643 CDX2Q99626 313 aaPredicted RBP9.73□□□□□ -0.85
NEIL1-202ENST00000561643 COMMD9Q9P000 198 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 OR5H14A6NHG9 310 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 F5H0A9 414 aaPredicted RBP9.73□□□□□ -0.85
NEIL1-202ENST00000561643 CCSO14618 274 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 GIMD1P0DJR0 217 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 NQO2P16083 231 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 ABOP16442 354 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 AGTR1P30556 359 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 AFF3P51826 1226 aaKnown RBP9.73□□□□□ -0.85
NEIL1-202ENST00000561643 CLRN1P58418 232 aa9.73□□□□□ -0.85
NEIL1-202ENST00000561643 MYBPHQ13203 477 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms