RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 GYPCP04921 128 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 PNMTP11086 282 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 MLNP12872 115 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 IL1RNP18510 177 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 CRYGSP22914 178 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 FASP25445 335 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 PSMB5P28074 263 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 IMPA1P29218 277 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 KIR2DS2P43631 304 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 OR3A4PP47883 348 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 HNRNPA3P51991 378 aaKnown RBP2.74□□□□□ -1.97
HERC1-215ENST00000561436 RAB38P57729 211 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 ARL6IP1Q15041 203 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 SPA17Q15506 151 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 LRRC36Q1X8D7 754 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 TRIM16LQ309B1 348 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 CHRFAM7AQ494W8 412 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 CCSMST1Q4G0I0 132 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 GGTA1PQ4G0N0 100 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 DEFB134Q4QY38 66 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 PYHIN1Q6K0P9 492 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 ENPP6Q6UWR7 440 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 UTS2BQ765I0 119 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 PPP1R27Q86WC6 154 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 SKA3Q8IX90 412 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 SLC35F2Q8IXU6 374 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 ZNF100Q8IYN0 542 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 SPAG16Q8N0X2 631 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 LINC01561Q8N1V8 128 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 LINC00612Q8N6U2 182 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 KIR3DL3Q8N743 410 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 ZNF740Q8NDX6 193 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 OR4D5Q8NGN0 318 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 RPL3LQ92901 407 aaKnown RBP2.74□□□□□ -1.97
HERC1-215ENST00000561436 EMG1Q92979 244 aaKnown RBP2.74□□□□□ -1.97
HERC1-215ENST00000561436 NEIL2Q969S2 332 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 ZMYND19Q96E35 227 aaPredicted RBP2.74□□□□□ -1.97
HERC1-215ENST00000561436 SNF8Q96H20 258 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 AMDHD1Q96NU7 426 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 SMR3AQ99954 134 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 AIF1LQ9BQI0 150 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 NIPSNAP3BQ9BS92 247 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 ANGPTL4Q9BY76 406 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 GOLPH3Q9H4A6 298 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 PRTFDC1Q9NRG1 225 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 UFSP2Q9NUQ7 469 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 STOX2Q9P2F5 926 aaPredicted RBP2.74□□□□□ -1.97
HERC1-215ENST00000561436 WARS2Q9UGM6 360 aaKnown RBP2.74□□□□□ -1.97
HERC1-215ENST00000561436 PHF11Q9UIL8 331 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 SPENQ96T58 3664 aaKnown RBP2.74□□□□□ -1.97
HERC1-215ENST00000561436 KNL1Q8NG31 2342 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 CEP192Q8TEP8 1941 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 METTL21EPA6NDL7 271 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 HELTA6NFD8 242 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 OR51F1A6NGY5 319 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 FAM166BA8MTA8 275 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 DEFB108AA8MXU0 73 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 CCL22O00626 93 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 ARPC3O15145 178 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 TAPBPO15533 448 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 RS1O15537 224 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 ZNF208O43345 1280 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 PRKYO43930 277 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 B4GALT2O60909 372 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 CBR3O75828 277 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 SCELO95171 688 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 VAPBO95292 243 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 IGKV3-11P04433 115 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 IFNA16P05015 189 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 ALOX5P09917 674 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 HNF1AP20823 631 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 FGF9P31371 208 aaPredicted RBP2.73□□□□□ -1.97
HERC1-215ENST00000561436 CD79BP40259 229 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 RPL13AP40429 203 aaKnown RBP2.73□□□□□ -1.97
HERC1-215ENST00000561436 MAGEA1P43355 309 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 MAGEA6P43360 314 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 CEBPDP49716 269 aaPredicted RBP2.73□□□□□ -1.97
HERC1-215ENST00000561436 CDK9P50750 372 aaKnown RBP2.73□□□□□ -1.97
HERC1-215ENST00000561436 PRKXP51817 358 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 ZNF136P52737 540 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 LIM2P55344 173 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 TBPL1P62380 186 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 KCNJ2P63252 427 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 BTG2P78543 158 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 REEP5Q00765 189 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 STX4Q12846 297 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 IL24Q13007 206 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 CUL1Q13616 776 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 AANATQ16613 207 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 NRF1Q16656 503 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 TIGITQ495A1 244 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 ACSBG2Q5FVE4 666 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 BEX5Q5H9J7 111 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 CTSL3PQ5NE16 218 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 TRIM40Q6P9F5 258 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 AGTRAPQ6RW13 159 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 UGT2A3Q6UWM9 527 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 GDPD3Q7L5L3 318 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 PRSS41Q7RTY9 318 aa2.73□□□□□ -1.97
HERC1-215ENST00000561436 HSD17B13Q7Z5P4 300 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms