RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 PPICP45877 212 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 OMPP47874 163 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 SLC6A8P48029 635 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 SLC9A3P48764 834 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 RORCP51449 518 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 GPR143P51810 404 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 BMXP51813 675 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 EFNA4P52798 201 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 PPP5CP53041 499 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 ATP12AP54707 1039 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 DVL1P1P54792 670 aaPredicted RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 CTBP2P56545 445 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 TAS2R43P59537 309 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 DEFA1P59665 94 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 DEFA3P59666 94 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 KRTAP10-3P60369 221 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 ACTC1P68032 377 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 EEF1A1P68104 462 aaKnown RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 ACTA1P68133 377 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 SIRPAP78324 504 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 IGLV3-21P80748 117 aaPredicted RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 BDH1Q02338 343 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 PRKCDQ05655 676 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 ACSM1Q08AH1 577 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 FUT7Q11130 342 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 PPP1R8Q12972 351 aaKnown RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 MLLT11Q13015 90 aaPredicted RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 MRPL28Q13084 256 aaKnown RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 GANABQ14697 944 aaKnown RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 EFNB3Q15768 340 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 ZNF141Q15928 474 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 TAF9Q16594 264 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 DUSP5Q16690 384 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 RGS21Q2M5E4 152 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 ZNF404Q494X3 552 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 TRMT12Q53H54 448 aaKnown RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 SYT14P1Q58G82 188 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 CXorf66Q5JRM2 361 aaPredicted RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 SPANXN2Q5MJ10 180 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 DCST2Q5T1A1 773 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 EEF1A1P5Q5VTE0 462 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 SIGIRRQ6IA17 410 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 WDR73Q6P4I2 378 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 C5orf46Q6UWT4 87 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 RBMS3Q6XE24 437 aaKnown RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 HSDL2Q6YN16 418 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 FRRS1Q6ZNA5 592 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 C9orf47Q6ZRZ4 202 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 KRT77Q7Z794 578 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 VRK2Q86Y07 508 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 MISPQ8IVT2 679 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 GPALPP1Q8IXQ4 340 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 ACBD7Q8N6N7 88 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 TCEANCQ8N8B7 351 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 NEXN-AS1Q8NBZ9 246 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 MORN4Q8NDC4 146 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 B3GNT7Q8NFL0 401 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 OR7G2Q8NG99 324 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 OR9Q2Q8NGE9 314 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 OR5D16Q8NGK9 328 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 B4GALNT2Q8NHY0 566 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 MCFD2Q8NI22 146 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 FNDC8Q8TC99 324 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 ZPLD1Q8TCW7 415 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 DYNC2LI1Q8TCX1 351 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 TMEM239Q8WW34 195 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 APH1BQ8WW43 257 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 TMED6Q8WW62 240 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 PHYHIPQ92561 330 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 PIK3R3Q92569 461 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 CDS1Q92903 461 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 DAZLQ92904 295 aaKnown RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 ABTB1Q969K4 478 aaPredicted RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 GIMAP5Q96F15 307 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 SH3YL1Q96HL8 342 aaPredicted RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 LRR1Q96L50 414 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 HARBI1Q96MB7 349 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 CSF3RQ99062 836 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 CITED1Q99966 193 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 FAM110AQ9BQ89 295 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 PCGF1Q9BSM1 259 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 DCUN1D5Q9BTE7 237 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 TSSK6Q9BXA6 273 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 RSPO3Q9BXY4 272 aaPredicted RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 AICDAQ9GZX7 198 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 DCSTAMPQ9H295 470 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 KCNN2Q9H2S1 579 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 PPP1R3EQ9H7J1 279 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 C12orf10Q9HB07 376 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 LPAR2Q9HBW0 351 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 FGF20Q9NP95 211 aaPredicted RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 NOX4Q9NPH5 578 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 EQTNQ9NQ60 294 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 HINT3Q9NQE9 182 aaKnown RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 EXOSC3Q9NQT5 275 aaKnown RBP2.73□□□□□ -1.97
SPG11-225ENST00000561391 UBQLN4Q9NRR5 601 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 FAIMQ9NVQ4 179 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 NECAP2Q9NVZ3 263 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 HAO2Q9NYQ3 351 aa2.73□□□□□ -1.97
SPG11-225ENST00000561391 TVP23BQ9NYZ1 205 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms