RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 TECTBQ96PL2 329 aa8.17□□□□□ -1.1
TPM1-225ENST00000560679 PRSS27Q9BQR3 290 aa8.17□□□□□ -1.1
TPM1-225ENST00000560679 EVA1AQ9H8M9 152 aa8.17□□□□□ -1.1
TPM1-225ENST00000560679 INIPQ9NRY2 104 aa8.17□□□□□ -1.1
TPM1-225ENST00000560679 ZNRD1Q9P1U0 126 aa8.17□□□□□ -1.1
TPM1-225ENST00000560679 SLC13A4Q9UKG4 626 aa8.17□□□□□ -1.1
TPM1-225ENST00000560679 VPREB3Q9UKI3 123 aa8.17□□□□□ -1.1
TPM1-225ENST00000560679 FOXJ3Q9UPW0 622 aa8.17□□□□□ -1.1
TPM1-225ENST00000560679 SIGLEC9Q9Y336 463 aa8.17□□□□□ -1.1
TPM1-225ENST00000560679 SNX5Q9Y5X3 404 aa8.17□□□□□ -1.1
TPM1-225ENST00000560679 A0A1B0GWJ7 208 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 TRAPPC13A5PLN9 417 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 NPIPB13A6NJU9 1138 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 NPIPB4C9JG80 1138 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 DOK2O60496 412 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 SERPINB7O75635 380 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 CCNB2O95067 398 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 COX5BP10606 129 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 GGT2P36268 569 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 HTR5AP47898 357 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 HMGA2P52926 109 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 CXCR4P61073 352 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 PCBD1P61457 104 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 NEDD8Q15843 81 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 DUSP7Q16829 419 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 MICAQ29983 383 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 CLEC12AQ5QGZ9 265 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 OR2T2Q6IF00 324 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 ARL9Q6T311 187 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 VASH1Q7L8A9 365 aaPredicted RBP8.16□□□□□ -1.1
TPM1-225ENST00000560679 OR13F1Q8NGS4 319 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 ITPKCQ96DU7 683 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 MPP4Q96JB8 637 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 DHRS1Q96LJ7 313 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 FEVQ99581 238 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 DPAGT1Q9H3H5 408 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 C20orf141Q9NUB4 165 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 ENOPH1Q9UHY7 261 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 TMCC3Q9ULS5 477 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 SH3GLB1Q9Y371 365 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 TPRKBQ9Y3C4 175 aa8.16□□□□□ -1.1
TPM1-225ENST00000560679 A0A1W2PPL8 197 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 J3KTA2 159 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 MRPS14O60783 128 aaKnown RBP8.15□□□□□ -1.1
TPM1-225ENST00000560679 NOL3O60936 208 aaKnown RBP8.15□□□□□ -1.1
TPM1-225ENST00000560679 OR7A10O76100 309 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 GADD45GO95257 159 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 HTR1AP08908 422 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 RAC2P15153 192 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 FUT1P19526 365 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 MSR1P21757 451 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 TUBG1P23258 451 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 DCKP27707 260 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 GATA4P43694 442 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 SRP9P49458 86 aaKnown RBP8.15□□□□□ -1.1
TPM1-225ENST00000560679 EFNB2P52799 333 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 SMIM11AP58511 58 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 DYNC1I2Q13409 638 aaKnown RBP8.15□□□□□ -1.1
TPM1-225ENST00000560679 METTL11BQ5VVY1 283 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 SLC35E4Q6ICL7 350 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 CCBE1Q6UXH8 406 aaPredicted RBP8.15□□□□□ -1.1
TPM1-225ENST00000560679 FBXW12Q6X9E4 464 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 Q6ZTK2 550 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 ERI1Q8IV48 349 aaKnown RBP8.15□□□□□ -1.1
TPM1-225ENST00000560679 C1orf87Q8N0U7 546 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 SPARTQ8N0X7 666 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 LYG1Q8N1E2 194 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 SCCPDHQ8NBX0 429 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 BPIFB6Q8NFQ5 453 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 OR8G5Q8NG78 346 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 CNIH3Q8TBE1 160 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 Q8TCH9 128 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 MUL1Q969V5 352 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 ISOC1Q96CN7 298 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 HRASLS5Q96KN8 279 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 ALG12Q9BV10 488 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 TXNIPQ9H3M7 391 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 ZNF556Q9HAH1 456 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 EMC7Q9NPA0 242 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 POLE4Q9NR33 117 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 TUBG2Q9NRH3 451 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 SCN3BQ9NY72 215 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 FBLN5Q9UBX5 448 aa8.15□□□□□ -1.1
TPM1-225ENST00000560679 LYSTQ99698 3801 aa8.15□□□□□ -1.11
TPM1-225ENST00000560679 OR6C6A6NF89 314 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 LRRC30A6NM36 301 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 C12orf71A8MTZ7 269 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 K7EIL1 84 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 FAM20BO75063 409 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 HLA-DPB1P04440 258 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 LIPFP07098 398 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 H1F0P07305 194 aaKnown RBP8.14□□□□□ -1.11
TPM1-225ENST00000560679 DBHP09172 617 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 EPHA2P29317 976 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 FMO3P31513 532 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 GABRA5P31644 462 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 NPY4RP50391 375 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 PRSS12P56730 875 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 ARF6P62330 175 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 CSNK2BP67870 215 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms