RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 MAGEB1P43366 347 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 SUCLG1P53597 346 aaKnown RBP7.63□□□□□ -1.19
CCDC33-209ENST00000560565 ATP1B3P54709 279 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 DCAF7P61962 342 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 FAM3AP98173 230 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 CFHR1Q03591 330 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 RUNX2Q13950 521 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 FAM74A1Q5RGS3 127 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 ZNF574Q6ZN55 896 aaPredicted RBP7.63□□□□□ -1.19
CCDC33-209ENST00000560565 TMPRSS9Q7Z410 1059 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 DCXRQ7Z4W1 244 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 TRAPPC6BQ86SZ2 158 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 CD163Q86VB7 1156 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 CA13Q8N1Q1 262 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 OR8G5Q8NG78 346 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 OR51L1Q8NGJ5 315 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 TERB2Q8NHR7 220 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 ZCCHC10Q8TBK6 192 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 RXFP4Q8TDU9 374 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 METTL21AQ8WXB1 218 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 C3orf49Q96BT1 292 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 SLC25A44Q96H78 314 aaPredicted RBP7.63□□□□□ -1.19
CCDC33-209ENST00000560565 C2orf50Q96LR7 162 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 DGAT2Q96PD7 388 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 SMAD5Q99717 465 aaKnown RBP7.63□□□□□ -1.19
CCDC33-209ENST00000560565 MACROD1Q9BQ69 325 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 OCSTAMPQ9BR26 566 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 NUDT22Q9BRQ3 303 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 URM1Q9BTM9 101 aaKnown RBP7.63□□□□□ -1.19
CCDC33-209ENST00000560565 NUDT9Q9BW91 350 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 ELOVL3Q9HB03 270 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 SEBOXQ9HB31 216 aaPredicted RBP7.63□□□□□ -1.19
CCDC33-209ENST00000560565 MMP25Q9NPA2 562 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 ASCL3Q9NQ33 180 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 C1orf123Q9NWV4 160 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 LUZP4Q9P127 313 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 PISDQ9UG56 409 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 KCNE5Q9UJ90 142 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 FARSAQ9Y285 508 aaKnown RBP7.63□□□□□ -1.19
CCDC33-209ENST00000560565 LOXL2Q9Y4K0 774 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 R4GMQ9 66 aa7.63□□□□□ -1.19
CCDC33-209ENST00000560565 TRAV8-7A0A075B6U6 113 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 TRAV36DV7A0A075B6V5 113 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 IGHV5-10-1A0A0J9YXX1 117 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 A0A1B0GW64 132 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 PMS2P1A4D2B8 440 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 NPIPB13A6NJU9 1138 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 CDRT15L2A8MXV6 281 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 NPIPB4C9JG80 1138 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 H3BMH7 237 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 AP4M1O00189 453 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 CYR61O00622 381 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 LDLRAD4O15165 306 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 OR2T1O43869 369 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 FGF17O60258 216 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 CA11O75493 328 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 EIF3GO75821 320 aaKnown RBP eCLIP7.62□□□□□ -1.19
CCDC33-209ENST00000560565 TSPAN15O95858 294 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 IFNA10P01566 189 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 IGHMP01871 453 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 HLA-DQA2P01906 255 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 CSTBP04080 98 aaKnown RBP7.62□□□□□ -1.19
CCDC33-209ENST00000560565 CD5P06127 495 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 ITGA5P08648 1049 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 ZNF823P16415 610 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 RCC1P18754 421 aaPredicted RBP7.62□□□□□ -1.19
CCDC33-209ENST00000560565 AGAP20933 346 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 CDKN2AP42771 156 aaKnown RBP7.62□□□□□ -1.19
CCDC33-209ENST00000560565 PTGFRP43088 359 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 PLA2G7Q13093 441 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 PPP1R1AQ13522 171 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 SGCAQ16586 387 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 C2orf68Q2NKX9 166 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 GFOD2Q3B7J2 385 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 LRRC37A5PQ49AS3 106 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 WDR38Q5JTN6 314 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 GLYATL3Q5SZD4 288 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 TMEM88Q6PEY1 159 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 KLHL24Q6TFL4 600 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 ATG4DQ86TL0 474 aaPredicted RBP7.62□□□□□ -1.19
CCDC33-209ENST00000560565 CATSPERDQ86XM0 798 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.62□□□□□ -1.19
CCDC33-209ENST00000560565 CBLN2Q8IUK8 224 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 JAGN1Q8N5M9 183 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 RFLNBQ8N5W9 214 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 LRRC75AQ8NAA5 344 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 OR56B1Q8NGI3 324 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 OR5D14Q8NGL3 314 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 OR13C3Q8NGS6 347 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 OR13C8Q8NGS7 320 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 ASB5Q8WWX0 329 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 EMG1Q92979 244 aaKnown RBP7.62□□□□□ -1.19
CCDC33-209ENST00000560565 SLC25A28Q96A46 364 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 RASD2Q96D21 266 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 CPNE2Q96FN4 548 aaPredicted RBP7.62□□□□□ -1.19
CCDC33-209ENST00000560565 KIRREL1Q96J84 757 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 CCDC74BQ96LY2 380 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 VSTM2LQ96N03 204 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 ZNF75AQ96N20 296 aa7.62□□□□□ -1.19
CCDC33-209ENST00000560565 PTCHD1Q96NR3 888 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms