RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SULT1C4O75897 302 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 TNFSF4P23510 183 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 TGFBR1P36897 503 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 MPV17P39210 176 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 CX3CR1P49238 355 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 ZNF81P51508 661 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 MMP16P51512 607 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 ZNF829Q3KNS6 432 aaPredicted RBP11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 SPATA46Q5T0L3 261 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 PGAP1Q75T13 922 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 FTMTQ8N4E7 242 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 SPSB4Q96A44 273 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 CMBLQ96DG6 245 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 CHCHD3Q9NX63 227 aaKnown RBP11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 ERVK13-1Q9NX77 482 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 MYEF2Q9P2K5 600 aaKnown RBP11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 SSX4O60224 188 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 CD55P08174 381 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 MRPL3P09001 348 aaKnown RBP11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 SLC25A16P16260 332 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 CPEP16870 476 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 ALDH3B1P43353 468 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 PDLIM4P50479 330 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 PRKXP51817 358 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 RIDAP52758 137 aaKnown RBP11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 ACSM1Q08AH1 577 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 TPBGQ13641 420 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 GK2Q14410 553 aaPredicted RBP11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 OR2G6Q5TZ20 316 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 ZNF322Q6U7Q0 402 aaPredicted RBP11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 MRPL21Q7Z2W9 205 aaKnown RBP11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 KCTD20Q7Z5Y7 419 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 LHFPL3Q86UP9 236 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 KLBQ86Z14 1044 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 OR51G2Q8NGK0 314 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 REPIN1Q9BWE0 567 aaKnown RBP11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 EGLN1Q9GZT9 426 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 OR10A2Q9H208 303 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 DLL4Q9NR61 685 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 INPP5EQ9NRR6 644 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 NDUFB11Q9NX14 153 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 LRP12Q9Y561 859 aa11.94□□□□□ -0.5
PKNOX1-209ENST00000560448 GPX5O75715 221 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 CLPXO76031 633 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 KRT8P05787 483 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 ANXA2P07355 339 aaKnown RBP11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 INHBBP09529 407 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 ZNF121P58317 390 aaPredicted RBP11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 DYNC1I2Q13409 638 aaKnown RBP11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 PRSS45Q7RTY3 260 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 PHC2Q8IXK0 858 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 ACBD7Q8N6N7 88 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 WFDC11Q8NEX6 87 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 OR8G5Q8NG78 346 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 OR13G1Q8NGZ3 307 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 OR52N1Q8NH53 320 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 HAVCR2Q8TDQ0 301 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 UBASH3BQ8TF42 649 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 FAM168AQ92567 244 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 Q96MF0 132 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 AMELYQ99218 206 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 CENPOQ9BU64 300 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 DECR2Q9NUI1 292 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 PTTG3PQ9NZH4 202 aa11.93□□□□□ -0.5
PKNOX1-209ENST00000560448 A0A1B0GWJ7 208 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 NDUFS7O75251 213 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 LALBAP00709 142 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 NAT2P11245 290 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 DAOP14920 347 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 TNFRSF1AP19438 455 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 ACHEP22303 614 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 GIFP27352 417 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 CRYBB2P43320 205 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 ACTA2P62736 377 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 ACTG2P63267 376 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 MZT1Q08AG7 82 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 SNAI3Q3KNW1 292 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 TIMM50Q3ZCQ8 353 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 LRRN1Q6UXK5 716 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 GDPGP1Q6ZNW5 385 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 PLEKHG7Q6ZR37 379 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 LINC00299Q6ZSB3 139 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 NAA40Q86UY6 237 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 KLHL36Q8N4N3 616 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 GATAD2BQ8WXI9 593 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 RDH5Q92781 318 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 CHCHD6Q9BRQ6 235 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 PIMREGQ9BSJ6 248 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 TMUB1Q9BVT8 246 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 DCSTAMPQ9H295 470 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 CHODLQ9H9P2 273 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 SAP30LQ9HAJ7 183 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 MRPL15Q9P015 296 aaKnown RBP11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 IL19Q9UHD0 177 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 IKZF2Q9UKS7 526 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 COPS3Q9UNS2 423 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 KLHDC2Q9Y2U9 406 aa11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 CAB39Q9Y376 341 aaPredicted RBP11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 SF3B6Q9Y3B4 125 aaKnown RBP11.92□□□□□ -0.5
PKNOX1-209ENST00000560448 OTOGQ6ZRI0 2925 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms