RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 TMEM235A6NFC5 223 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 AGAP14A8MT82 685 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 CELA2BP08218 269 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-208ENST00000560371 CLEC2LP0C7M8 214 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 RPS19P39019 145 aaKnown RBP12.13□□□□□ -0.47
TRAF3-208ENST00000560371 SOWAHCQ53LP3 525 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-208ENST00000560371 LYPD8Q6UX82 237 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 SFTPA1Q8IWL2 248 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 LINC01555Q8NAE3 123 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 OR2G2Q8NGZ5 317 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 OR4C3Q8NH37 302 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 SLC39A7Q92504 469 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 FAM221AA4D161 298 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 PPIHO43447 177 aaKnown RBP12.13□□□□□ -0.47
TRAF3-208ENST00000560371 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-208ENST00000560371 TPBGQ13641 420 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 HIST2H3PS2Q5TEC6 136 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 FAM122CQ6P4D5 195 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 TMEM104Q8NE00 496 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 OR1F12Q8NHA8 337 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 PRR7Q8TB68 274 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 ALG14Q96F25 216 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 ZNF2Q9BSG1 426 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-208ENST00000560371 SIAEQ9HAT2 523 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 COL11A2P13942 1736 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-208ENST00000560371 HFEQ30201 348 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 GREB1Q4ZG55 1949 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 TOX3O15405 576 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-208ENST00000560371 MAGEB4O15481 346 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-208ENST00000560371 SOX18P35713 384 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 PSMB3P49720 205 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 SLC30A7Q8NEW0 376 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 MITD1Q8WV92 249 aa12.13□□□□□ -0.47
TRAF3-208ENST00000560371 KTI12Q96EK9 354 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-208ENST00000560371 ALG1L2C9J202 215 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 TRAF3IP2O43734 574 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-208ENST00000560371 ZNF793Q6ZN11 406 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 ST8SIA4Q92187 359 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 NARFLQ9H6Q4 476 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 SLC22A13Q9Y226 551 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 DTYMKP23919 212 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 FUT6P51993 359 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 WDR74Q6RFH5 385 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-208ENST00000560371 ALKAL2Q6UX46 152 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 ADGRG3Q86Y34 549 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 CCDC71Q8IV32 467 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-208ENST00000560371 SYS1Q8N2H4 156 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 A3GALT2U3KPV4 340 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 KCNE1BA0A087WTH5 132 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 HOXD12P35452 270 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 PPT1P50897 306 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 FLI1Q01543 452 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-208ENST00000560371 SPANXN5Q5MJ07 72 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 SPINK14Q6IE38 97 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 SPNS2Q8IVW8 549 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 HSD17B11Q8NBQ5 300 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 PP6455Q8WZ26 134 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 PINX1Q96BK5 328 aaKnown RBP12.12□□□□□ -0.47
TRAF3-208ENST00000560371 DHRS9Q9BPW9 319 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 GABARAPL3Q9BY60 117 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 ONECUT1Q9UBC0 465 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 ARRDC5A6NEK1 342 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 TCAPO15273 167 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 ST8SIA3O43173 380 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 POU2F2P09086 479 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 FAHP16930 419 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 MICBQ29980 383 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 RHBDD2Q6NTF9 364 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 SKA3Q8IX90 412 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 C17orf78Q8N4C9 275 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 LAMP3Q9UQV4 416 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 NDUFB3O43676 98 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 SNCGO76070 127 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 NME2P22392 152 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 RFX2P48378 723 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 OSR2Q8N2R0 312 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 SDCBPO00560 298 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-208ENST00000560371 OIP5O43482 229 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 COX14Q96I36 57 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 SLCO1C1Q9NYB5 712 aa12.12□□□□□ -0.47
TRAF3-208ENST00000560371 M0QZ24 198 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 GNG3P63215 75 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 FAM122AQ96E09 287 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 NMES1Q9C002 83 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 GPR37O15354 613 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 HLA-HP01893 362 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 OR10D3Q8NH80 312 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 SLC25A19Q9HC21 320 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 TERTO14746 1132 aaKnown RBP12.11□□□□□ -0.47
TRAF3-208ENST00000560371 NKX2-2O95096 273 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 SVBPQ8N300 66 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 FYTTD1Q96QD9 318 aaKnown RBP12.11□□□□□ -0.47
TRAF3-208ENST00000560371 OR2A5Q96R48 311 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 NIPSNAP3BQ9BS92 247 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 EXOSC3Q9NQT5 275 aaKnown RBP12.11□□□□□ -0.47
TRAF3-208ENST00000560371 NCBP2LA6PVI3 153 aaKnown RBP12.11□□□□□ -0.47
TRAF3-208ENST00000560371 TCTN1Q2MV58 587 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 SOHLH1Q5JUK2 328 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 ZNF547Q8IVP9 402 aa12.11□□□□□ -0.47
TRAF3-208ENST00000560371 OR52I2Q8NH67 350 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms