RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 TMED9Q9BVK6 235 aa17.59■□□□□ 0.41
PSEN1-225ENST00000560005 COMMD4Q9H0A8 199 aa17.59■□□□□ 0.41
PSEN1-225ENST00000560005 RAB1BQ9H0U4 201 aa17.59■□□□□ 0.41
PSEN1-225ENST00000560005 TXNL4BQ9NX01 149 aaKnown RBP17.59■□□□□ 0.41
PSEN1-225ENST00000560005 SLCO1C1Q9NYB5 712 aa17.59■□□□□ 0.41
PSEN1-225ENST00000560005 TRRAPQ9Y4A5 3859 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 ZNF587BE7ETH6 402 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 E9PI62 339 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 UPK3AO75631 287 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 GATBO75879 557 aaKnown RBP17.58■□□□□ 0.4
PSEN1-225ENST00000560005 WNT11O96014 354 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 APOC1P02654 83 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 CST2P09228 141 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 OR4A8P0C604 315 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 SOX6P35712 828 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 PPOXP50336 477 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 IDH3GP51553 393 aaPredicted RBP17.58■□□□□ 0.4
PSEN1-225ENST00000560005 DVL1P1P54792 670 aaPredicted RBP17.58■□□□□ 0.4
PSEN1-225ENST00000560005 SLC3A1Q07837 685 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 SPCS2Q15005 226 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 ADIPOQQ15848 244 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 ZNF829Q3KNS6 432 aaPredicted RBP17.58■□□□□ 0.4
PSEN1-225ENST00000560005 TSPO2Q5TGU0 170 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 VHLLQ6RSH7 139 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 GHSRQ92847 366 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 TMEM203Q969S6 136 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 SLAMF6Q96DU3 332 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 KCNS3Q9BQ31 491 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 DCUN1D5Q9BTE7 237 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 CENPOQ9BU64 300 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 TTTY10Q9BZA0 68 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 PLK3Q9H4B4 646 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 TMEM38BQ9NVV0 291 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 ZNF281Q9Y2X9 895 aa17.58■□□□□ 0.4
PSEN1-225ENST00000560005 IGHV1-18A0A0C4DH31 117 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 TMEM89A2RUT3 159 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 TMEM212A6NML5 194 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 ZNF878C9JN71 531 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 RPP14O95059 124 aaKnown RBP17.57■□□□□ 0.4
PSEN1-225ENST00000560005 CDAP32320 146 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 GRB2P62993 217 aaKnown RBP17.57■□□□□ 0.4
PSEN1-225ENST00000560005 ROR2Q01974 943 aaKnown RBP17.57■□□□□ 0.4
PSEN1-225ENST00000560005 TAF13Q15543 124 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 EFNB3Q15768 340 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 HIKESHIQ53FT3 197 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 YIF1BQ5BJH7 314 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 LRRN1Q6UXK5 716 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 LINC00299Q6ZSB3 139 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 LINC00346Q8IVM7 164 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 OR2G2Q8NGZ5 317 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 OR5AK2Q8NH90 309 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 ABHD4Q8TB40 342 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 FOXB1Q99853 325 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 EMC7Q9NPA0 242 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 CENPMQ9NSP4 180 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 LHFPL6Q9Y693 200 aa17.57■□□□□ 0.4
PSEN1-225ENST00000560005 SIRT4Q9Y6E7 314 aaPredicted RBP17.57■□□□□ 0.4
PSEN1-225ENST00000560005 FAM157AC9JC47 383 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 GABRPO00591 440 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 MAGEB4O15481 346 aaPredicted RBP17.56■□□□□ 0.4
PSEN1-225ENST00000560005 IL1AP01583 271 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 ZNF182P17025 639 aaPredicted RBP17.56■□□□□ 0.4
PSEN1-225ENST00000560005 MAPK3P27361 379 aaPredicted RBP17.56■□□□□ 0.4
PSEN1-225ENST00000560005 MPGP29372 298 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 OPRL1P41146 370 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 RPS27P42677 84 aaKnown RBP17.56■□□□□ 0.4
PSEN1-225ENST00000560005 FABP5Q01469 135 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 ECH1Q13011 328 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 CEACAM16Q2WEN9 425 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 C1QTNF12Q5T7M4 302 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 DPPA2Q7Z7J5 298 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 ZCCHC24Q8N2G6 241 aaKnown RBP17.56■□□□□ 0.4
PSEN1-225ENST00000560005 DYNC2LI1Q8TCX1 351 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 PGLYRP3Q96LB9 341 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 ZNF416Q9BWM5 594 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 ASH2LQ9UBL3 628 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 LRP12Q9Y561 859 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 A3GALT2U3KPV4 340 aa17.56■□□□□ 0.4
PSEN1-225ENST00000560005 ACOD1A6NK06 481 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 PRR32B1ATL7 298 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 PSMD9O00233 223 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 ARL6IP5O75915 188 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 CRYAAP02489 173 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 PSMB10P40306 273 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 MMP16P51512 607 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 SCRN3Q0VDG4 424 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 LSAMPQ13449 338 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 NDNFQ8TB73 568 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 ZNF418Q8TF45 676 aaPredicted RBP17.55■□□□□ 0.4
PSEN1-225ENST00000560005 FAM216AQ8WUB2 273 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 NABP1Q96AH0 204 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 AMELYQ99218 206 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 MOB1AQ9H8S9 216 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 CCDC59Q9P031 241 aaKnown RBP17.55■□□□□ 0.4
PSEN1-225ENST00000560005 GRIP1Q9Y3R0 1128 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 R4GMQ9 66 aa17.55■□□□□ 0.4
PSEN1-225ENST00000560005 HSD11B1P28845 292 aa17.54■□□□□ 0.4
PSEN1-225ENST00000560005 HIST1H3AP68431 136 aa17.54■□□□□ 0.4
PSEN1-225ENST00000560005 ENDOGQ14249 297 aaKnown RBP17.54■□□□□ 0.4
PSEN1-225ENST00000560005 ACSM3Q53FZ2 586 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms