RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 MS4A15Q8N5U1 240 aa8.03□□□□□ -1.12
HERC1-206ENST00000559996 KBTBD8Q8NFY9 601 aa8.03□□□□□ -1.12
HERC1-206ENST00000559996 ADAT3Q96EY9 351 aaPredicted RBP8.03□□□□□ -1.12
HERC1-206ENST00000559996 KCNS3Q9BQ31 491 aa8.03□□□□□ -1.12
HERC1-206ENST00000559996 TMED9Q9BVK6 235 aa8.03□□□□□ -1.12
HERC1-206ENST00000559996 BCL2L14Q9BZR8 327 aa8.03□□□□□ -1.12
HERC1-206ENST00000559996 FGF23Q9GZV9 251 aaPredicted RBP8.03□□□□□ -1.12
HERC1-206ENST00000559996 RGCCQ9H4X1 137 aa8.03□□□□□ -1.12
HERC1-206ENST00000559996 ESRP2Q9H6T0 727 aaKnown RBP8.03□□□□□ -1.12
HERC1-206ENST00000559996 SP140LQ9H930 580 aa8.03□□□□□ -1.12
HERC1-206ENST00000559996 NGBQ9NPG2 151 aa8.03□□□□□ -1.12
HERC1-206ENST00000559996 TUBG2Q9NRH3 451 aa8.03□□□□□ -1.12
HERC1-206ENST00000559996 ZNF275Q9NSD4 429 aaPredicted RBP8.03□□□□□ -1.12
HERC1-206ENST00000559996 MYEF2Q9P2K5 600 aaKnown RBP8.03□□□□□ -1.12
HERC1-206ENST00000559996 EIF3KQ9UBQ5 218 aaKnown RBP8.03□□□□□ -1.12
HERC1-206ENST00000559996 GTF2A1LQ9UNN4 478 aa8.03□□□□□ -1.12
HERC1-206ENST00000559996 ABCA4P78363 2273 aa8.03□□□□□ -1.12
HERC1-206ENST00000559996 ANKHD1Q8IWZ3 2542 aaKnown RBP8.02□□□□□ -1.12
HERC1-206ENST00000559996 ROS1P08922 2347 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 SPTAN1Q13813 2472 aaKnown RBP8.02□□□□□ -1.13
HERC1-206ENST00000559996 RAI1Q7Z5J4 1906 aaPredicted RBP8.02□□□□□ -1.13
HERC1-206ENST00000559996 ANKRD61A6NGH8 418 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 A6NIN4 97 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 A6NNC1 897 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 ZNF879B4DU55 563 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 CASKO14936 926 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 DHRS3O75911 302 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 ATE1O95260 518 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 IGHV3-13P01766 116 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 CD3EP07766 207 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 UCHL1P09936 223 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 UBCP0CG48 685 aaKnown RBP8.02□□□□□ -1.13
HERC1-206ENST00000559996 CD37P11049 281 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 IGFBP3P17936 291 aaPredicted RBP8.02□□□□□ -1.13
HERC1-206ENST00000559996 KITLGP21583 273 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 GALP22466 123 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 FGF9P31371 208 aaPredicted RBP8.02□□□□□ -1.13
HERC1-206ENST00000559996 FABP6P51161 128 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 SNTB2Q13425 540 aaKnown RBP8.02□□□□□ -1.13
HERC1-206ENST00000559996 ADIPOQQ15848 244 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 Q499Y3 187 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 ZNF672Q499Z4 452 aaPredicted RBP8.02□□□□□ -1.13
HERC1-206ENST00000559996 OR2T2Q6IF00 324 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 Q6ZR03 302 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 DOK3Q7L591 496 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 RNF144BQ7Z419 303 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 LYPD6Q86Y78 171 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 C1orf174Q8IYL3 243 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 PARP16Q8N5Y8 322 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 ZNF676Q8N7Q3 588 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 PIK3IP1Q96FE7 263 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 FAM71F1Q96KD3 344 aaPredicted RBP8.02□□□□□ -1.13
HERC1-206ENST00000559996 DERL3Q96Q80 235 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 SLC30A2Q9BRI3 323 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 CENPOQ9BU64 300 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 MRPL37Q9BZE1 423 aaKnown RBP8.02□□□□□ -1.13
HERC1-206ENST00000559996 ZNF442Q9H7R0 627 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 CA10Q9NS85 328 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 TXNL4BQ9NX01 149 aaKnown RBP8.02□□□□□ -1.13
HERC1-206ENST00000559996 KCNN3Q9UGI6 736 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 ZNF391Q9UJN7 358 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 FZR1Q9UM11 496 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 HHLA2Q9UM44 414 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 STUB1Q9UNE7 303 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 HELZ2Q9BYK8 2649 aaKnown RBP8.02□□□□□ -1.13
HERC1-206ENST00000559996 PLCE1Q9P212 2302 aa8.02□□□□□ -1.13
HERC1-206ENST00000559996 PKDREJQ9NTG1 2253 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 TRAV8-7A0A075B6U6 113 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 IGKV1-9A0A0C4DH69 117 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 A0A1W2PPK0 400 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 TRIM64BA6NI03 449 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 DHRS7CA6NNS2 312 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 CD300LBA8K4G0 201 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 IQCF6A8MYZ5 107 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 SYT7O43581 403 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 CD8AP01732 235 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 DDOSTP39656 456 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 MMP15P51511 669 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 UBE2V2Q15819 145 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 SWI5Q1ZZU3 235 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 GFOD2Q3B7J2 385 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 ZNF718Q3SXZ3 478 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 ZMAT1Q5H9K5 638 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 CEP78Q5JTW2 689 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 GPR107Q5VW38 600 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 RGS7BPQ6MZT1 257 aaPredicted RBP8.01□□□□□ -1.13
HERC1-206ENST00000559996 SLC22A25Q6T423 547 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 PGAP1Q75T13 922 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 GPR141Q7Z602 305 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 OR56B2PQ8NGI1 322 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 OR5L1Q8NGL2 311 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 GPR148Q8TDV2 347 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 AKAP1Q92667 903 aaKnown RBP eCLIP8.01□□□□□ -1.13
HERC1-206ENST00000559996 MRPL24Q96A35 216 aaKnown RBP8.01□□□□□ -1.13
HERC1-206ENST00000559996 FGGYQ96C11 551 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 RADILQ96JH8 1075 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 OR14A2Q96R54 314 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 GFI1Q99684 422 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 COMMD4Q9H0A8 199 aa8.01□□□□□ -1.13
HERC1-206ENST00000559996 VCX3AQ9NNX9 186 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms