RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 PHC2Q8IXK0 858 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 SYS1Q8N2H4 156 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 C17orf78Q8N4C9 275 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 ZNF808Q8N4W9 903 aaPredicted RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 STEAP2Q8NFT2 490 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 KBTBD8Q8NFY9 601 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 OR51E1Q8TCB6 317 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 RPS4Y2Q8TD47 263 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 ASB5Q8WWX0 329 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 GTF3AQ92664 365 aaKnown RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 UFD1Q92890 307 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 RNASE6Q93091 150 aaKnown RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 YIPF6Q96EC8 236 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 PGAM5Q96HS1 289 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 FAM71F1Q96KD3 344 aaPredicted RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 COG8Q96MW5 612 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 OR14A2Q96R54 314 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 KCNJ15Q99712 375 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 COQ7Q99807 217 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 MED18Q9BUE0 208 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 FUNDC2Q9BWH2 189 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 HDHD5Q9BXW7 423 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 PBOV1Q9GZY1 135 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 HDHD2Q9H0R4 259 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 PPIL3Q9H2H8 161 aaKnown RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 TRIM36Q9NQ86 728 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 ELOVL5Q9NYP7 299 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 MYEF2Q9P2K5 600 aaKnown RBP4.49□□□□□ -1.69
SPG11-220ENST00000559933 OR52A1Q9UKL2 312 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 AMDHD2Q9Y303 409 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 STARD10Q9Y365 291 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 PCDHGB1Q9Y5G3 927 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 TMEM14AQ9Y6G1 99 aa4.49□□□□□ -1.69
SPG11-220ENST00000559933 ITPR3Q14573 2671 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 TRBV2A0A0J9YWF9 115 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 IGHV3-64DA0A0J9YX35 117 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 LOC100506127A0A0U1RQW1 187 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 A0A1B0GTI1 187 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 IQCMA0A1B0GVH7 501 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.48□□□□□ -1.69
SPG11-220ENST00000559933 A0A1W2PPR1 153 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 OR4C45A6NMZ5 311 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 H3BSA7 217 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 ABCD4O14678 606 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 MRPS14O60783 128 aaKnown RBP4.48□□□□□ -1.69
SPG11-220ENST00000559933 NCR1O76036 304 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 SERPINA5P05154 406 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 CLEC2LP0C7M8 214 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 CPEP16870 476 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 ACKR3P25106 362 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 ARR3P36575 388 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 RPL5P46777 297 aaKnown RBP4.48□□□□□ -1.69
SPG11-220ENST00000559933 TGM4P49221 684 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 RGS6P49758 472 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 NCS1P62166 190 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 RPS11P62280 158 aaKnown RBP eCLIP4.48□□□□□ -1.69
SPG11-220ENST00000559933 HOXA4Q00056 320 aaPredicted RBP4.48□□□□□ -1.69
SPG11-220ENST00000559933 ZNF92Q03936 586 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 TNK1Q13470 666 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 TBC1D28Q2M2D7 210 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 ZNF829Q3KNS6 432 aaPredicted RBP4.48□□□□□ -1.69
SPG11-220ENST00000559933 FBXL19-AS1Q494R0 122 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 SYT6Q5T7P8 510 aaPredicted RBP4.48□□□□□ -1.69
SPG11-220ENST00000559933 C22orf42Q6IC83 251 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 ASPHD2Q6ICH7 369 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 TMEM91Q6ZNR0 172 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 GPR141Q7Z602 305 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 LRP11Q86VZ4 500 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 CLVS1Q8IUQ0 354 aaPredicted RBP4.48□□□□□ -1.69
SPG11-220ENST00000559933 OR5AS1Q8N127 324 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 ZNF676Q8N7Q3 588 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 BHLHE23Q8NDY6 225 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 OR5AK2Q8NH90 309 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 NDNFQ8TB73 568 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 FCGR1BQ92637 280 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 GHSRQ92847 366 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 SPTSSAQ969W0 71 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 SMIM19Q96E16 107 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 PIK3IP1Q96FE7 263 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 REEP6Q96HR9 211 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 RADILQ96JH8 1075 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 MNTQ99583 582 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 KCNS3Q9BQ31 491 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 CHCHD6Q9BRQ6 235 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 CENPOQ9BU64 300 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 C1QTNF5Q9BXJ0 243 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 NIPAL2Q9H841 368 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 CDH20Q9HBT6 801 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 EXOSC4Q9NPD3 245 aaKnown RBP4.48□□□□□ -1.69
SPG11-220ENST00000559933 KCNJ16Q9NPI9 418 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 GPR84Q9NQS5 396 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 NDUFB11Q9NX14 153 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 CRNNQ9UBG3 495 aaPredicted RBP4.48□□□□□ -1.69
SPG11-220ENST00000559933 NUFIP1Q9UHK0 495 aaKnown RBP4.48□□□□□ -1.69
SPG11-220ENST00000559933 LRRK2Q5S007 2527 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 ANKHD1Q8IWZ3 2542 aaKnown RBP4.48□□□□□ -1.69
SPG11-220ENST00000559933 SPTBN1Q01082 2364 aaKnown RBP4.48□□□□□ -1.69
SPG11-220ENST00000559933 CADP27708 2225 aa4.48□□□□□ -1.69
SPG11-220ENST00000559933 TRAV8-7A0A075B6U6 113 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 hCG_38984A0A1B0GV85 526 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms