RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 SOX7Q9BT81 388 aa12.28□□□□□ -0.44
SMAD6-204ENST00000559931 HHLA2Q9UM44 414 aa12.28□□□□□ -0.44
SMAD6-204ENST00000559931 EDARQ9UNE0 448 aa12.28□□□□□ -0.44
SMAD6-204ENST00000559931 PIGLQ9Y2B2 252 aa12.28□□□□□ -0.44
SMAD6-204ENST00000559931 ZNF281Q9Y2X9 895 aa12.28□□□□□ -0.44
SMAD6-204ENST00000559931 PMF1-BGLAPU3KQ54 211 aa12.28□□□□□ -0.44
SMAD6-204ENST00000559931 FBN2P35556 2912 aa12.27□□□□□ -0.44
SMAD6-204ENST00000559931 LRBAP50851 2863 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 IGLV3-9A0A075B6K5 115 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 A0A1B0GTI1 187 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 hCG_38984A0A1B0GV85 526 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 ANKRD30BLA7E2S9 258 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 M0R233 179 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 ISG15P05161 165 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 SOD3P08294 240 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 DANCRP0C864 163 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 PCMT1P22061 227 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 ACHEP22303 614 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 KRTAP10-9P60411 292 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 RIPPLY1Q0D2K3 151 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 MLLT11Q13015 90 aaPredicted RBP12.27□□□□□ -0.45
SMAD6-204ENST00000559931 MST1LQ2TV78 715 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 ARMCX4Q5H9R4 360 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 LIPKQ5VXJ0 399 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 DMKNQ6E0U4 476 aaPredicted RBP12.27□□□□□ -0.45
SMAD6-204ENST00000559931 FTMTQ8N4E7 242 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 CSNK2A3Q8NEV1 391 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 OR8G5Q8NG78 346 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 OR13C3Q8NGS6 347 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 TSEN15Q8WW01 171 aaKnown RBP12.27□□□□□ -0.45
SMAD6-204ENST00000559931 NRGNQ92686 78 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 SMIM19Q96E16 107 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 CCL19Q99731 98 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 VRK1Q99986 396 aaPredicted RBP12.27□□□□□ -0.45
SMAD6-204ENST00000559931 PLEKHA1Q9HB21 404 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 MSL2Q9HCI7 577 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 ISYNA1Q9NPH2 558 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 CYSLTR2Q9NS75 346 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 TMEM100Q9NV29 134 aa12.27□□□□□ -0.45
SMAD6-204ENST00000559931 A6NIN4 97 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 IQCF6A8MYZ5 107 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 PLPP2O43688 288 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 DHRS3O75911 302 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 INMTO95050 263 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 NAT2P11245 290 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 ZNF20P17024 532 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 GNALP38405 381 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 LIPAP38571 399 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 ZNF81P51508 661 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 DOC2BQ14184 412 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 TSTQ16762 297 aaKnown RBP12.26□□□□□ -0.45
SMAD6-204ENST00000559931 SWI5Q1ZZU3 235 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 ZMAT1Q5H9K5 638 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 UBE2UQ5VVX9 321 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 CCDC54Q8NEL0 328 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 OR13G1Q8NGZ3 307 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 GPR148Q8TDV2 347 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 PIGCQ92535 297 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 TRAF4Q9BUZ4 470 aaPredicted RBP12.26□□□□□ -0.45
SMAD6-204ENST00000559931 TMED9Q9BVK6 235 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 PAPOLGQ9BWT3 736 aaKnown RBP12.26□□□□□ -0.45
SMAD6-204ENST00000559931 MS4A5Q9H3V2 200 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 LIME1Q9H400 295 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 FBXO9Q9UK97 447 aaPredicted RBP12.26□□□□□ -0.45
SMAD6-204ENST00000559931 DHDHQ9UQ10 334 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 POLQO75417 2590 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 ARFGEF3Q5TH69 2177 aa12.26□□□□□ -0.45
SMAD6-204ENST00000559931 RAI1Q7Z5J4 1906 aaPredicted RBP12.25□□□□□ -0.45
SMAD6-204ENST00000559931 LOC390937A0A1W2PQ73 354 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 TPD52L2O43399 206 aaKnown RBP12.25□□□□□ -0.45
SMAD6-204ENST00000559931 SPRY3O43610 288 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 LILRA1O75019 489 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 IGLV3-1P01715 115 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 CD8AP01732 235 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 CPEP16870 476 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 FAHP16930 419 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 CA6P23280 308 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 ACKR3P25106 362 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 SOX2P48431 317 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 GPR50Q13585 617 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 TPBGQ13641 420 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 OR8B8Q15620 311 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 TMEM255AQ5JRV8 349 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 DTX2Q86UW9 622 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 PLPP7Q8NBV4 271 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 OR2Z1Q8NG97 314 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 OR14K1Q8NGZ2 314 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 OR10AC1Q8NH08 325 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 ITFG2Q969R8 447 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 TMEM203Q969S6 136 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 FGGYQ96C11 551 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 OPALINQ96PE5 141 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 HIST1H2AAQ96QV6 131 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 CACNG6Q9BXT2 260 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 BATF3Q9NR55 127 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 CGGBP1Q9UFW8 167 aaPredicted RBP12.25□□□□□ -0.45
SMAD6-204ENST00000559931 ENPP5Q9UJA9 477 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 RHBDD3Q9Y3P4 386 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 V9GYS6 101 aa12.25□□□□□ -0.45
SMAD6-204ENST00000559931 NAV2Q8IVL1 2488 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms