RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 OR11L1Q8NGX0 322 aa9.17□□□□□ -0.94
SPG11-216ENST00000559347 SPATA3Q8NHX4 192 aa9.17□□□□□ -0.94
SPG11-216ENST00000559347 SGK3Q96BR1 496 aa9.17□□□□□ -0.94
SPG11-216ENST00000559347 PGAM5Q96HS1 289 aa9.17□□□□□ -0.94
SPG11-216ENST00000559347 TEAD3Q99594 435 aa9.17□□□□□ -0.94
SPG11-216ENST00000559347 TMEM246Q9BRR3 403 aa9.17□□□□□ -0.94
SPG11-216ENST00000559347 YIPF3Q9GZM5 350 aa9.17□□□□□ -0.94
SPG11-216ENST00000559347 OR10A2Q9H208 303 aa9.17□□□□□ -0.94
SPG11-216ENST00000559347 SEMA6AQ9H2E6 1030 aa9.17□□□□□ -0.94
SPG11-216ENST00000559347 NIPAL2Q9H841 368 aa9.17□□□□□ -0.94
SPG11-216ENST00000559347 TMEM165Q9HC07 324 aa9.17□□□□□ -0.94
SPG11-216ENST00000559347 BRD7Q9NPI1 651 aa9.17□□□□□ -0.94
SPG11-216ENST00000559347 ENOPH1Q9UHY7 261 aa9.17□□□□□ -0.94
SPG11-216ENST00000559347 LAMP5Q9UJQ1 280 aa9.17□□□□□ -0.94
SPG11-216ENST00000559347 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.16□□□□□ -0.94
SPG11-216ENST00000559347 ANKRD30BLA7E2S9 258 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 PRR32B1ATL7 298 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 C3orf80F5H4A9 247 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 TRAPPC2LH3BP13 241 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 TCF21O43680 179 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 FSHBP01225 129 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 IRF2P14316 349 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 ADRA2CP18825 462 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 GSK3AP49840 483 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 HCCSP53701 268 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 ACTR3P61158 418 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 EFNB1P98172 346 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 HOXA4Q00056 320 aaPredicted RBP9.16□□□□□ -0.94
SPG11-216ENST00000559347 AADACL4Q5VUY2 407 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 NXNL2Q5VZ03 156 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 CCDC121Q6ZUS5 278 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 BCDIN3DQ7Z5W3 292 aaKnown RBP9.16□□□□□ -0.94
SPG11-216ENST00000559347 KRT77Q7Z794 578 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 WDR86Q86TI4 376 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.16□□□□□ -0.94
SPG11-216ENST00000559347 TEX29Q8N6K0 151 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 TCEANCQ8N8B7 351 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 PLPP7Q8NBV4 271 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 DEFB108BQ8NET1 73 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 OR8B12Q8NGG6 310 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 TMEM163Q8TC26 289 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 PYDC1Q8WXC3 89 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 CENPNQ96H22 339 aaPredicted RBP9.16□□□□□ -0.94
SPG11-216ENST00000559347 CNN2Q99439 309 aaKnown RBP9.16□□□□□ -0.94
SPG11-216ENST00000559347 SSBP3Q9BWW4 388 aaPredicted RBP9.16□□□□□ -0.94
SPG11-216ENST00000559347 GABARAPL3Q9BY60 117 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 TTTY10Q9BZA0 68 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 RGCCQ9H4X1 137 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 FN3KRPQ9HA64 309 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 MMP26Q9NRE1 261 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 RNF7Q9UBF6 113 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 OPN4Q9UHM6 478 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 COPS3Q9UNS2 423 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 PPIAL4AQ9Y536 164 aa9.16□□□□□ -0.94
SPG11-216ENST00000559347 SAC3D1A6NKF1 404 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 SLC22A31A6NKX4 558 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 H3BNX3 289 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 PSMD9O00233 223 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 WNT2P09544 360 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 ZNF12P17014 697 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 EPHA1P21709 976 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 CPT2P23786 658 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 ACKR3P25106 362 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 CD80P33681 288 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 PAX2Q02962 417 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 ROM1Q03395 351 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 SCGB2A2Q13296 93 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 KPNB1Q14974 876 aaKnown RBP9.15□□□□□ -0.94
SPG11-216ENST00000559347 KCTD18Q6PI47 426 aaPredicted RBP9.15□□□□□ -0.94
SPG11-216ENST00000559347 DEGS2Q6QHC5 323 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 DCDC5Q6ZRR9 648 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 MEPCEQ7L2J0 689 aaKnown RBP9.15□□□□□ -0.94
SPG11-216ENST00000559347 SPERTQ8NA61 448 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 C19orf18Q8NEA5 215 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 CSNK2A3Q8NEV1 391 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 SEMA6DQ8NFY4 1073 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 OR8S1Q8NH09 359 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 DACT3Q96B18 629 aaPredicted RBP9.15□□□□□ -0.94
SPG11-216ENST00000559347 ITPKCQ96DU7 683 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 NEIL1Q96FI4 390 aaPredicted RBP9.15□□□□□ -0.94
SPG11-216ENST00000559347 LYZL4Q96KX0 146 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 PAPOLGQ9BWT3 736 aaKnown RBP9.15□□□□□ -0.94
SPG11-216ENST00000559347 PPP1R3EQ9H7J1 279 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 ADGRL4Q9HBW9 690 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 C14orf119Q9NWQ9 140 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 C1orf123Q9NWV4 160 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 FAM206AQ9NX38 181 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 MIOXQ9UGB7 285 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 OR5V1Q9UGF6 321 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 ZNF391Q9UJN7 358 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 INSIG2Q9Y5U4 225 aa9.15□□□□□ -0.94
SPG11-216ENST00000559347 TENM1Q9UKZ4 2725 aa9.15□□□□□ -0.95
SPG11-216ENST00000559347 A6NLC8 198 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 POLR2IP36954 125 aaKnown RBP9.14□□□□□ -0.95
SPG11-216ENST00000559347 PSMB10P40306 273 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 PITPNBP48739 271 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 GNB2P62879 340 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 MFGE8Q08431 387 aaPredicted RBP9.14□□□□□ -0.95
SPG11-216ENST00000559347 MZT1Q08AG7 82 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 ZNF154Q13106 437 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms