RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 IGHV3-20A0A0C4DH32 117 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 MYOGP15173 224 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 BCKDHBP21953 392 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 THBS2P35442 1172 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 H2BFSP57053 126 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 RPS18P62269 152 aaKnown RBP6.4□□□□□ -1.38
USP3-210ENST00000559192 ZNF266Q14584 549 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 SLC10A1Q14973 349 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 COL19A1Q14993 1142 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 INPP5JQ15735 1006 aaPredicted RBP6.4□□□□□ -1.38
USP3-210ENST00000559192 ETV3LQ6ZN32 361 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 SLAMF6Q96DU3 332 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 ABHD6Q9BV23 337 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 MED29Q9NX70 200 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 KCNIP1Q9NZI2 227 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 KLHL13Q9P2N7 655 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 PIAS3Q9Y6X2 628 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 TNS1Q9HBL0 1735 aaKnown RBP6.4□□□□□ -1.38
USP3-210ENST00000559192 PLSCR5A0PG75 271 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 ST6GAL1P15907 406 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 TMEM183BQ1AE95 376 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 ATPAF1Q5TC12 328 aaPredicted RBP6.4□□□□□ -1.38
USP3-210ENST00000559192 GGNBP1Q5YKI7 109 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 ETFBKMTQ8IXQ9 262 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 ADAD2Q8NCV1 583 aaKnown RBP6.4□□□□□ -1.38
USP3-210ENST00000559192 OR13H1Q8NG92 308 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 OR4C3Q8NH37 302 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 NUBPLQ8TB37 319 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 ATOH1Q92858 354 aaPredicted RBP6.4□□□□□ -1.38
USP3-210ENST00000559192 SLC25A38Q96DW6 304 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 LPAR4Q99677 370 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 DCAF16Q9NXF7 216 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 ZMIZ1Q9ULJ6 1067 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 B3GALT5Q9Y2C3 310 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 PATJQ8NI35 1801 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 WDR90Q96KV7 1748 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 TRBV11-1A0A0K0K1C0 115 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 hCG_1809904A0A1W2PP81 198 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 A0A1W2PPH5 198 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 A0A1W2PR64 198 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 A0A1W2PRV1 198 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 ZNF320A2RRD8 509 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 XRCC2O43543 280 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 GREM1O60565 184 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 MPZL1O95297 269 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 CRYBA1P05813 215 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 CA3P07451 260 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 DBHP09172 617 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 CCKARP32238 428 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 MTCP1P56278 107 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 BTNL8Q6UX41 500 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 IL34Q6ZMJ4 242 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 LINC00518Q8N0U6 118 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 OR52N5Q8NH56 324 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 SLC37A2Q8TED4 501 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 SPTSSAQ969W0 71 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 ISOC2Q96AB3 205 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 INTS12Q96CB8 462 aaKnown RBP6.4□□□□□ -1.39
USP3-210ENST00000559192 TVP23CQ96ET8 276 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 HHIPQ96QV1 700 aa6.4□□□□□ -1.39
USP3-210ENST00000559192 IGKV1-8A0A0C4DH67 115 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 A8MVM7 634 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 SULT2B1O00204 365 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 EPPINO95925 133 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 CISD3P0C7P0 127 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 DAOP14920 347 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 CLDN17P56750 224 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 ERVK-16P61578 105 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 ZNF90Q03938 601 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 SSBP1Q04837 148 aaKnown RBP6.39□□□□□ -1.39
USP3-210ENST00000559192 PLCXD3Q63HM9 321 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 OPN5Q6U736 354 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 OR2G3Q8NGZ4 309 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 EDAQ92838 391 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 TCTN2Q96GX1 697 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 C4orf45Q96LM5 186 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 PBX4Q9BYU1 374 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 DEFB126Q9BYW3 111 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 PBOV1Q9GZY1 135 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 S1PR5Q9H228 398 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 ZSWIM8A7E2V4 1837 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 M0QZK8 103 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 GGCTO75223 188 aaKnown RBP6.39□□□□□ -1.39
USP3-210ENST00000559192 ADAP1O75689 374 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 HPNP05981 417 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 ACKR3P25106 362 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 GABREP78334 506 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 PJVKQ0ZLH3 352 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 CLEC12BQ2HXU8 276 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 MIDNQ504T8 468 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 Q5PR19 223 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 RPUSD3Q6P087 351 aaKnown RBP6.39□□□□□ -1.39
USP3-210ENST00000559192 DHRS11Q6UWP2 260 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 BLNKQ8WV28 456 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 HLA-CQ95604 372 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 TSLPQ969D9 159 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 KIRREL1Q96J84 757 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 C2orf50Q96LR7 162 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 OR8B4Q96RC9 309 aa6.39□□□□□ -1.39
USP3-210ENST00000559192 TPPP3Q9BW30 176 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms