RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MALLQ13021 153 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 ZNF154Q13106 437 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 OR8G1Q15617 311 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 RFX4Q33E94 735 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 SAMD4BQ5PRF9 694 aaKnown RBP6.13□□□□□ -1.43
SPG11-213ENST00000558988 PRAMEF6Q5VXH4 476 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 SLC18B1Q6NT16 456 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 LRRC28Q86X40 367 aaPredicted RBP6.13□□□□□ -1.43
SPG11-213ENST00000558988 ZDHHC21Q8IVQ6 265 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 DEFB107AQ8IZN7 70 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 MUC20Q8N307 709 aaPredicted RBP6.13□□□□□ -1.43
SPG11-213ENST00000558988 PROKR2Q8NFJ6 384 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 SLC26A10Q8NG04 563 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 OR52L1Q8NGH7 329 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 OR9Q1Q8NGQ5 310 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 OR2AE1Q8NHA4 323 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 GNPDA2Q8TDQ7 276 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 FAM216AQ8WUB2 273 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 TAF15Q92804 592 aaKnown RBP eCLIP6.13□□□□□ -1.43
SPG11-213ENST00000558988 SLCO4A1Q96BD0 722 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 OTULINQ96BN8 352 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 SIGLEC11Q96RL6 698 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 COQ7Q99807 217 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 ATF6BQ99941 703 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 WACQ9BTA9 647 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 MS4A7Q9GZW8 240 aaPredicted RBP6.13□□□□□ -1.43
SPG11-213ENST00000558988 CENPMQ9NSP4 180 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 TBC1D23Q9NUY8 699 aa6.13□□□□□ -1.43
SPG11-213ENST00000558988 SOX21Q9Y651 276 aaPredicted RBP6.13□□□□□ -1.43
SPG11-213ENST00000558988 TRAV40A0A0B4J280 105 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 MDFIC2A0A1B0GVS7 189 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 hCG_1807616A0A1W2PRN6 198 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 GGT3PA6NGU5 568 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 A6NLC8 198 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 LRRC30A6NM36 301 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 M0R135 149 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 TNFRSF11BO00300 401 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 SNX3O60493 162 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 DNAJC8O75937 253 aaPredicted RBP6.12□□□□□ -1.43
SPG11-213ENST00000558988 SOX14O95416 240 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 TXNDC12O95881 172 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 SEMG1P04279 462 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 GYPBP06028 91 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 ACSM4P0C7M7 580 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 SLC2A1P11166 492 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 ZNF12P17014 697 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 ATP6V1B2P21281 511 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 TUBG1P23258 451 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 CA6P23280 308 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 CD80P33681 288 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 IFNGR2P38484 337 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 PITPNBP48739 271 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 PRKXP51817 358 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 RAD23AP54725 363 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 TPTEP56180 551 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 UBA52P62987 128 aaKnown RBP6.12□□□□□ -1.43
SPG11-213ENST00000558988 COX10Q12887 443 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 BAMBIQ13145 260 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 GK2Q14410 553 aaPredicted RBP6.12□□□□□ -1.43
SPG11-213ENST00000558988 TAF13Q15543 124 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 OR8B8Q15620 311 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 SLC36A3Q495N2 470 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 TMEM155Q4W5P6 130 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 SFRP4Q6FHJ7 346 aaPredicted RBP6.12□□□□□ -1.43
SPG11-213ENST00000558988 SLC27A4Q6P1M0 643 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 PGBD2Q6P3X8 592 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 PGM2L1Q6PCE3 622 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 C16orf89Q6UX73 402 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 BTNL3Q6UXE8 466 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 FBXW12Q6X9E4 464 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 ZNF620Q6ZNG0 422 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 PGAP1Q75T13 922 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 KLBQ86Z14 1044 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 PGAM4Q8N0Y7 254 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 ZDHHC22Q8N966 263 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 OR8B3Q8NGG8 313 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 OR6K6Q8NGW6 343 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 OR11L1Q8NGX0 322 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 ZFAND2BQ8WV99 257 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 SPRYD4Q8WW59 207 aaPredicted RBP6.12□□□□□ -1.43
SPG11-213ENST00000558988 POP5Q969H6 163 aaKnown RBP6.12□□□□□ -1.43
SPG11-213ENST00000558988 ZNF799Q96GE5 643 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 C16orf92Q96LL3 132 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 TECTBQ96PL2 329 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 OR8B2Q96RD0 313 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 TMEM246Q9BRR3 403 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 FUZQ9BT04 418 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 COPS4Q9BT78 406 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 KRTAP4-4Q9BYR3 166 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 GORASP2Q9H8Y8 452 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 TUBG2Q9NRH3 451 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 TMEM100Q9NV29 134 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 MRPL22Q9NWU5 206 aaKnown RBP6.12□□□□□ -1.43
SPG11-213ENST00000558988 TAGLN3Q9UI15 199 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 NUP50Q9UKX7 468 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 PCDHGB1Q9Y5G3 927 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 INSIG2Q9Y5U4 225 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 U3KQV3 271 aa6.12□□□□□ -1.43
SPG11-213ENST00000558988 PPIAL4EA0A075B759 164 aa6.11□□□□□ -1.43
SPG11-213ENST00000558988 TMEM89A2RUT3 159 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms