RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 SLC22A25Q6T423 547 aa15.54■□□□□ 0.08
CLPX-203ENST00000558958 ACBD4Q8NC06 268 aa15.54■□□□□ 0.08
CLPX-203ENST00000558958 NUP37Q8NFH4 326 aa15.54■□□□□ 0.08
CLPX-203ENST00000558958 FAM222BQ8WU58 562 aa15.54■□□□□ 0.08
CLPX-203ENST00000558958 ITFG2Q969R8 447 aa15.54■□□□□ 0.08
CLPX-203ENST00000558958 DGCR14Q96DF8 476 aaKnown RBP15.54■□□□□ 0.08
CLPX-203ENST00000558958 FAM192AQ9GZU8 254 aa15.54■□□□□ 0.08
CLPX-203ENST00000558958 NOX4Q9NPH5 578 aa15.54■□□□□ 0.08
CLPX-203ENST00000558958 RSL24D1Q9UHA3 163 aaKnown RBP15.54■□□□□ 0.08
CLPX-203ENST00000558958 GSTK1Q9Y2Q3 226 aa15.54■□□□□ 0.08
CLPX-203ENST00000558958 COL12A1Q99715 3063 aa15.53■□□□□ 0.08
CLPX-203ENST00000558958 NOL3O60936 208 aaKnown RBP15.53■□□□□ 0.08
CLPX-203ENST00000558958 CD2P06729 351 aa15.53■□□□□ 0.08
CLPX-203ENST00000558958 MAP2K3P46734 347 aa15.53■□□□□ 0.08
CLPX-203ENST00000558958 PRSS12P56730 875 aa15.53■□□□□ 0.08
CLPX-203ENST00000558958 VBP1P61758 197 aa15.53■□□□□ 0.08
CLPX-203ENST00000558958 NCS1P62166 190 aa15.53■□□□□ 0.08
CLPX-203ENST00000558958 PARP16Q8N5Y8 322 aa15.53■□□□□ 0.08
CLPX-203ENST00000558958 SEMA6DQ8NFY4 1073 aa15.53■□□□□ 0.08
CLPX-203ENST00000558958 KLF14Q8TD94 323 aaPredicted RBP15.53■□□□□ 0.08
CLPX-203ENST00000558958 FGGYQ96C11 551 aa15.53■□□□□ 0.08
CLPX-203ENST00000558958 C10orf35Q96D05 121 aa15.53■□□□□ 0.08
CLPX-203ENST00000558958 CMBLQ96DG6 245 aa15.53■□□□□ 0.08
CLPX-203ENST00000558958 ADAT3Q96EY9 351 aaPredicted RBP15.53■□□□□ 0.08
CLPX-203ENST00000558958 SHISA9B4DS77 424 aa15.52■□□□□ 0.08
CLPX-203ENST00000558958 H3BMQ9 156 aa15.52■□□□□ 0.08
CLPX-203ENST00000558958 ARL6IP5O75915 188 aa15.52■□□□□ 0.08
CLPX-203ENST00000558958 CD3EP07766 207 aa15.52■□□□□ 0.08
CLPX-203ENST00000558958 RAC2P15153 192 aa15.52■□□□□ 0.08
CLPX-203ENST00000558958 LOXP28300 417 aaPredicted RBP15.52■□□□□ 0.08
CLPX-203ENST00000558958 TGFBR1P36897 503 aa15.52■□□□□ 0.08
CLPX-203ENST00000558958 RIPPLY1Q0D2K3 151 aa15.52■□□□□ 0.08
CLPX-203ENST00000558958 ADAM5Q6NVV9 412 aa15.52■□□□□ 0.08
CLPX-203ENST00000558958 TMEM171Q8WVE6 324 aa15.52■□□□□ 0.08
CLPX-203ENST00000558958 C12orf43Q96C57 262 aaKnown RBP15.52■□□□□ 0.08
CLPX-203ENST00000558958 ORAI1Q96D31 301 aa15.52■□□□□ 0.08
CLPX-203ENST00000558958 HAVCR1Q96D42 359 aa15.52■□□□□ 0.08
CLPX-203ENST00000558958 KCTD7Q96MP8 289 aa15.52■□□□□ 0.08
CLPX-203ENST00000558958 PLEKHA1Q9HB21 404 aa15.52■□□□□ 0.08
CLPX-203ENST00000558958 PIGLQ9Y2B2 252 aa15.52■□□□□ 0.08
CLPX-203ENST00000558958 LRRK2Q5S007 2527 aa15.52■□□□□ 0.07
CLPX-203ENST00000558958 GGT3PA6NGU5 568 aa15.52■□□□□ 0.07
CLPX-203ENST00000558958 A6NIN4 97 aa15.52■□□□□ 0.07
CLPX-203ENST00000558958 CD300LBA8K4G0 201 aa15.52■□□□□ 0.07
CLPX-203ENST00000558958 FAHP16930 419 aa15.52■□□□□ 0.07
CLPX-203ENST00000558958 ZNF20P17024 532 aa15.52■□□□□ 0.07
CLPX-203ENST00000558958 CALRP27797 417 aaKnown RBP15.52■□□□□ 0.07
CLPX-203ENST00000558958 MPV17P39210 176 aa15.52■□□□□ 0.07
CLPX-203ENST00000558958 RPS23P62266 143 aaKnown RBP15.52■□□□□ 0.07
CLPX-203ENST00000558958 ZNF718Q3SXZ3 478 aa15.52■□□□□ 0.07
CLPX-203ENST00000558958 HSD17B12Q53GQ0 312 aa15.52■□□□□ 0.07
CLPX-203ENST00000558958 MBNL2Q5VZF2 373 aaKnown RBP15.52■□□□□ 0.07
CLPX-203ENST00000558958 ASPHD2Q6ICH7 369 aa15.52■□□□□ 0.07
CLPX-203ENST00000558958 RGS7BPQ6MZT1 257 aaPredicted RBP15.52■□□□□ 0.07
CLPX-203ENST00000558958 OR56B2PQ8NGI1 322 aa15.52■□□□□ 0.07
CLPX-203ENST00000558958 ANKRD61A6NGH8 418 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 PRSS44E7EML9 344 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 SLC22A1O15245 554 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 ZNF250P15622 560 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 THBS4P35443 961 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 DDOSTP39656 456 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 FABP6P51161 128 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 PSG7Q13046 419 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 MSMPQ1L6U9 139 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 ZBTB37Q5TC79 503 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 OR2T2Q6IF00 324 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 MEX3BQ6ZN04 569 aaKnown RBP15.51■□□□□ 0.07
CLPX-203ENST00000558958 KRT74Q7RTS7 529 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 SERPINA12Q8IW75 414 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 PIK3IP1Q96FE7 263 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 HS3ST6Q96QI5 342 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 TMEM204Q9BSN7 226 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 CA10Q9NS85 328 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 RNF115Q9Y4L5 304 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 ATP23Q9Y6H3 246 aa15.51■□□□□ 0.07
CLPX-203ENST00000558958 TRAV8-7A0A075B6U6 113 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 TRAV1-2A0A0B4J238 106 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 SHISA3A0PJX4 238 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 SELEP16581 610 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 SRMP19623 302 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 FSTP19883 344 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 GCH1P30793 250 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 GNALP38405 381 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 SPCS2Q15005 226 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 DAZAP2Q15038 168 aaPredicted RBP15.5■□□□□ 0.07
CLPX-203ENST00000558958 TMEM255AQ5JRV8 349 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 VHLLQ6RSH7 139 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 CSNK2A3Q8NEV1 391 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 KBTBD8Q8NFY9 601 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 PP6455Q8WZ26 134 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 ZNF442Q9H7R0 627 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 TAS2R4Q9NYW5 299 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 CKLFQ9UBR5 152 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 FZR1Q9UM11 496 aa15.5■□□□□ 0.07
CLPX-203ENST00000558958 SPTAN1Q13813 2472 aaKnown RBP15.5■□□□□ 0.07
CLPX-203ENST00000558958 ZNF816-ZNF321PA0A0X1KG74 233 aa15.49■□□□□ 0.07
CLPX-203ENST00000558958 IGFBP3P17936 291 aaPredicted RBP15.49■□□□□ 0.07
CLPX-203ENST00000558958 KITLGP21583 273 aa15.49■□□□□ 0.07
CLPX-203ENST00000558958 MTNR1BP49286 362 aa15.49■□□□□ 0.07
CLPX-203ENST00000558958 TMEM42Q69YG0 159 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms