RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 PRR31Q5SQ13 230 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 RPL13AP3Q6NVV1 102 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 NLRC3Q7RTR2 1065 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 DPY19L4Q7Z388 723 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 TIGD4Q8IY51 512 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 ADGRG5Q8IZF4 528 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 OR10G2Q8NGC3 310 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 OR6N2Q8NGY6 317 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 SGMS2Q8NHU3 365 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 ERGIC1Q969X5 290 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 ABHD6Q9BV23 337 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 MAGIXQ9H6Y5 334 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 FN3KRPQ9HA64 309 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 CMC2Q9NRP2 79 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 MRPL15Q9P015 296 aaKnown RBP11.21□□□□□ -0.61
VPS18-203ENST00000558855 SAMHD1Q9Y3Z3 626 aaKnown RBP11.21□□□□□ -0.61
VPS18-203ENST00000558855 OOEPA6NGQ2 149 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 A6NLC8 198 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 ACOT8O14734 319 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 SELENOFO60613 162 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 DCTN3O75935 186 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 ACKR3P25106 362 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 ZNF121P58317 390 aaPredicted RBP11.2□□□□□ -0.62
VPS18-203ENST00000558855 SPATS1Q496A3 300 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 FAM57BQ71RH2 274 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 ERI1Q8IV48 349 aaKnown RBP11.2□□□□□ -0.62
VPS18-203ENST00000558855 BBS1Q8NFJ9 593 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 OR2T33Q8NG76 320 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 RNF133Q8WVZ7 376 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 CCDC124Q96CT7 223 aaKnown RBP11.2□□□□□ -0.62
VPS18-203ENST00000558855 LYZL4Q96KX0 146 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 CHIAQ9BZP6 476 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 SEMA6AQ9H2E6 1030 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 BRD7Q9NPI1 651 aa11.2□□□□□ -0.62
VPS18-203ENST00000558855 FAM181BA6NEQ2 426 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 PRR32B1ATL7 298 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 ZNF879B4DU55 563 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 DVL1O14640 695 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 ENSAO43768 121 aaKnown RBP11.19□□□□□ -0.62
VPS18-203ENST00000558855 ANXA2P07355 339 aaKnown RBP11.19□□□□□ -0.62
VPS18-203ENST00000558855 MELTFP08582 738 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 CPT2P23786 658 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 GRK5P34947 590 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 OPRL1P41146 370 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 TRIM25Q14258 630 aaKnown RBP11.19□□□□□ -0.62
VPS18-203ENST00000558855 GFOD2Q3B7J2 385 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 WDR38Q5JTN6 314 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 TEX36Q5VZQ5 186 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 SHISA2Q6UWI4 295 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 WDR82Q6UXN9 313 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 Q6YL49 198 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 DHFR2Q86XF0 187 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 PDZD9Q8IXQ8 264 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 LINC00471Q8N535 108 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 FAM216BQ8N7L0 139 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 LRRC29Q8WV35 223 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 SLC25A28Q96A46 364 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 TMIGD2Q96BF3 282 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 REEP6Q96HR9 211 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 NSL1Q96IY1 281 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 WDFY2Q96P53 400 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 CCT8L2Q96SF2 557 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 INTS14Q96SY0 518 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 FEVQ99581 238 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 CCL13Q99616 98 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 REEP1Q9H902 201 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 ZMAT3Q9HA38 289 aaKnown RBP11.19□□□□□ -0.62
VPS18-203ENST00000558855 RHBDD3Q9Y3P4 386 aa11.19□□□□□ -0.62
VPS18-203ENST00000558855 hCG_1807616A0A1W2PRN6 198 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 SRRM5B3KS81 715 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 XRCC2O43543 280 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 GSTT1P30711 240 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 MTNR1AP48039 350 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 GSK3AP49840 483 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 HCCSP53701 268 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 ARF6P62330 175 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 TAF13Q15543 124 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 DMRTC1Q5HYR2 192 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 C16orf87Q6PH81 154 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 FIP1L1Q6UN15 594 aaKnown RBP11.18□□□□□ -0.62
VPS18-203ENST00000558855 CD300LDQ6UXZ3 194 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 BTN2A1Q7KYR7 527 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 OR1M1Q8NGA1 313 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 HPSE2Q8WWQ2 592 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 LHX4Q969G2 390 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 OTULINQ96BN8 352 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 SLC22A4Q9H015 551 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 WDR13Q9H1Z4 485 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 ZNF696Q9H7X3 374 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 NDE1Q9NXR1 346 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 C1RLQ9NZP8 487 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 ERVK-18Q9QC07 812 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 BAIAP2Q9UQB8 552 aa11.18□□□□□ -0.62
VPS18-203ENST00000558855 A0A0U1RQK1 487 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 RIIAD1A6NNX1 92 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 TOX4O94842 621 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 GLCEO94923 617 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 PRKACGP22612 351 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 NAA10P41227 235 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms