RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 SARAFQ96BY9 339 aa11.28□□□□□ -0.6
SMAD3-207ENST00000558763 ITPKCQ96DU7 683 aa11.28□□□□□ -0.6
SMAD3-207ENST00000558763 C1orf147Q96MC9 270 aaPredicted RBP11.28□□□□□ -0.6
SMAD3-207ENST00000558763 SLX1AQ9BQ83 275 aa11.28□□□□□ -0.6
SMAD3-207ENST00000558763 PRRG4Q9BZD6 226 aa11.28□□□□□ -0.6
SMAD3-207ENST00000558763 NOX3Q9HBY0 568 aa11.28□□□□□ -0.6
SMAD3-207ENST00000558763 B3GNT2Q9NY97 397 aa11.28□□□□□ -0.6
SMAD3-207ENST00000558763 NLKQ9UBE8 527 aa11.28□□□□□ -0.6
SMAD3-207ENST00000558763 CACNG2Q9Y698 323 aa11.28□□□□□ -0.6
SMAD3-207ENST00000558763 CFAP46Q8IYW2 2715 aa11.28□□□□□ -0.6
SMAD3-207ENST00000558763 SLC22A20A6NK97 555 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 ZNF587BE7ETH6 402 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 DHRS3O75911 302 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 ZNF20P17024 532 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 RAB3AP20336 220 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 GDNFP39905 211 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 UNC119Q13432 240 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 KRTCAP3Q53RY4 240 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 AGAP6Q5VW22 663 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 OR10K2Q6IF99 312 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 COMMD2Q86X83 199 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 PAQR4Q8N4S7 273 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-207ENST00000558763 CPEB3Q8NE35 698 aaKnown RBP11.27□□□□□ -0.61
SMAD3-207ENST00000558763 SGK3Q96BR1 496 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 WBP1Q96G27 269 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 SORCS2Q96PQ0 1159 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 UQCC2Q9BRT2 126 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 RNF121Q9H920 327 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 GTF3C1Q12789 2109 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 WIPF3A6NGB9 483 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 APOC1P02654 83 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 HNRNPCP07910 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
SMAD3-207ENST00000558763 ARSBP15848 533 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 ACKR3P25106 362 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 HTR5AP47898 357 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 PCBD1P61457 104 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 GUSBP1Q15486 140 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 C9orf135Q5VTT2 229 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 MZT2BQ6NZ67 158 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 CHMP1BQ7LBR1 199 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 OR52H1Q8NGJ2 320 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 FOXRED1Q96CU9 486 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-207ENST00000558763 SPACA5Q96QH8 159 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 MARVELD1Q9BSK0 173 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 GP6Q9HCN6 339 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 KLK11Q9UBX7 282 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 PRSS50Q9UI38 385 aa11.27□□□□□ -0.61
SMAD3-207ENST00000558763 OR14I1A6ND48 311 aa11.26□□□□□ -0.61
SMAD3-207ENST00000558763 KRT33AO76009 404 aa11.26□□□□□ -0.61
SMAD3-207ENST00000558763 IL18BPO95998 194 aa11.26□□□□□ -0.61
SMAD3-207ENST00000558763 TPOP07202 933 aa11.26□□□□□ -0.61
SMAD3-207ENST00000558763 MRPS10P82664 201 aaKnown RBP11.26□□□□□ -0.61
SMAD3-207ENST00000558763 PABPC1L2AQ5JQF8 200 aa11.26□□□□□ -0.61
SMAD3-207ENST00000558763 TMEM255AQ5JRV8 349 aa11.26□□□□□ -0.61
SMAD3-207ENST00000558763 ZNF585AQ6P3V2 769 aa11.26□□□□□ -0.61
SMAD3-207ENST00000558763 GFRALQ6UXV0 394 aa11.26□□□□□ -0.61
SMAD3-207ENST00000558763 PGAP1Q75T13 922 aa11.26□□□□□ -0.61
SMAD3-207ENST00000558763 KRT74Q7RTS7 529 aa11.26□□□□□ -0.61
SMAD3-207ENST00000558763 TOMM5Q8N4H5 51 aa11.26□□□□□ -0.61
SMAD3-207ENST00000558763 OR2AE1Q8NHA4 323 aa11.26□□□□□ -0.61
SMAD3-207ENST00000558763 PTX4Q96A99 478 aa11.26□□□□□ -0.61
SMAD3-207ENST00000558763 ATPIF1Q9UII2 106 aa11.26□□□□□ -0.61
SMAD3-207ENST00000558763 RP1L1Q8IWN7 2480 aaPredicted RBP11.26□□□□□ -0.61
SMAD3-207ENST00000558763 A0A096LPE4 126 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 FAM240BA0A1B0GVZ2 78 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 A0A1W2PPZ6 126 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 SS18L1O75177 396 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-207ENST00000558763 VSIG8P0DPA2 414 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 PRF1P14222 555 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 FAHP16930 419 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 THBS4P35443 961 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 INPP1P49441 399 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 TPTEP56180 551 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 FAPQ12884 760 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 DYRK1AQ13627 763 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 UBE2V2Q15819 145 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 MOGAT2Q3SYC2 334 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 CHST5Q9GZS9 411 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 FBLN5Q9UBX5 448 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 INTS1Q8N201 2190 aaKnown RBP11.25□□□□□ -0.61
SMAD3-207ENST00000558763 LOC100509620A0A075B734 347 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 TMEM14DPA8MWL7 114 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 ATXN7O15265 892 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-207ENST00000558763 ALX3O95076 343 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 FARS2O95363 451 aaKnown RBP11.25□□□□□ -0.61
SMAD3-207ENST00000558763 BPNT1O95861 308 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 HLA-HP01893 362 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 ALDOBP05062 364 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 EDN3P14138 238 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 ZNF93P35789 620 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-207ENST00000558763 DMRTC1Q5HYR2 192 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 PLET1Q6UQ28 207 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 COLCA1Q6ZS62 124 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 UTS2BQ765I0 119 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 CD163Q86VB7 1156 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 MCEMP1Q8IX19 187 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 CDH26Q8IXH8 852 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 TRIB1Q96RU8 372 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 OR10A2Q9H208 303 aa11.25□□□□□ -0.61
SMAD3-207ENST00000558763 C12orf49Q9H741 205 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms