RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 ATP6V1B2P21281 511 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 PRTN3P24158 256 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 FMO3P31513 532 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 OTX1P32242 354 aaPredicted RBP6.73□□□□□ -1.33
TRAF3-205ENST00000558700 PYCR1P32322 319 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 RBMXP38159 391 aaKnown RBP6.73□□□□□ -1.33
TRAF3-205ENST00000558700 MAGEA2P43356 314 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 ENTPD1P49961 510 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 NPY4RP50391 375 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 BLVRAP53004 296 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 PAX2Q02962 417 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 PAX8Q06710 450 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 MZT1Q08AG7 82 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 BAMBIQ13145 260 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 IKZF1Q13422 519 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 GALEQ14376 348 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 OR8G1Q15617 311 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 RSPO1Q2MKA7 263 aaPredicted RBP6.73□□□□□ -1.33
TRAF3-205ENST00000558700 KLF17Q5JT82 389 aaPredicted RBP6.73□□□□□ -1.33
TRAF3-205ENST00000558700 PRAMEF6Q5VXH4 476 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 DRAM2Q6UX65 266 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 C9orf139Q6ZV77 190 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 DCXRQ7Z4W1 244 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 ARHGAP24Q8N264 748 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 LNX2Q8N448 690 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 SPERTQ8NA61 448 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 AQP11Q8NBQ7 271 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 OR2T33Q8NG76 320 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 OR10S1Q8NGN2 331 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 OR9Q1Q8NGQ5 310 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 RAB40AQ8WXH6 277 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 SLC25A28Q96A46 364 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 SLCO4A1Q96BD0 722 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 UPRTQ96BW1 309 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 TECTBQ96PL2 329 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 MMADHCQ9H3L0 296 aaPredicted RBP6.73□□□□□ -1.33
TRAF3-205ENST00000558700 MAGIXQ9H6Y5 334 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 TMEM165Q9HC07 324 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 TRIM36Q9NQ86 728 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 ARL8BQ9NVJ2 186 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 MRPL15Q9P015 296 aaKnown RBP6.73□□□□□ -1.33
TRAF3-205ENST00000558700 KIF17Q9P2E2 1029 aa6.73□□□□□ -1.33
TRAF3-205ENST00000558700 TVP23AA6NH52 213 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 A6NLC8 198 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 CLDN34H7C241 214 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 SPRY1O43609 319 aaPredicted RBP6.72□□□□□ -1.33
TRAF3-205ENST00000558700 GMDSO60547 372 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 SOX14O95416 240 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 PLATP00750 562 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 IGLV1-40P01703 118 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 RNASE1P07998 156 aaKnown RBP6.72□□□□□ -1.33
TRAF3-205ENST00000558700 CA6P23280 308 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 CD80P33681 288 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 SLC15A1P46059 708 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 HMGA2P52926 109 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 SLC25A1P53007 311 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 GRB2P62993 217 aaKnown RBP6.72□□□□□ -1.33
TRAF3-205ENST00000558700 ZNF92Q03936 586 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 DBPQ10586 325 aaPredicted RBP6.72□□□□□ -1.33
TRAF3-205ENST00000558700 MAB21L1Q13394 359 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 CRMP1Q14194 572 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 GK3PQ14409 553 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 TAF13Q15543 124 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 OR8B8Q15620 311 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 SNAI3Q3KNW1 292 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 FAM201AQ5SY85 155 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 GLYATL3Q5SZD4 288 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 WDR25Q64LD2 544 aaPredicted RBP6.72□□□□□ -1.33
TRAF3-205ENST00000558700 OR2T5Q6IEZ7 315 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 ZNF770Q6IQ21 691 aaPredicted RBP6.72□□□□□ -1.33
TRAF3-205ENST00000558700 LCN8Q6JVE9 175 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 SLC37A3Q8NCC5 494 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 OR56B2PQ8NGI1 322 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 OR8D4Q8NGM9 314 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 OR6K6Q8NGW6 343 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 OR2T29Q8NH02 315 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 OR2AE1Q8NHA4 323 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 TEX47Q8TBZ9 253 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 DACT3Q96B18 629 aaPredicted RBP6.72□□□□□ -1.33
TRAF3-205ENST00000558700 SLAMF6Q96DU3 332 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 NUDT16L1Q9BRJ7 211 aaKnown RBP6.72□□□□□ -1.33
TRAF3-205ENST00000558700 REEP1Q9H902 201 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 SP140LQ9H930 580 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 UFSP2Q9NUQ7 469 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 IL20Q9NYY1 176 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 RNF7Q9UBF6 113 aa6.72□□□□□ -1.33
TRAF3-205ENST00000558700 SAMHD1Q9Y3Z3 626 aaKnown RBP6.72□□□□□ -1.33
TRAF3-205ENST00000558700 TRAV38-1A0A0B4J264 116 aa6.71□□□□□ -1.34
TRAF3-205ENST00000558700 KIR2DS1A0A191URI9 304 aa6.71□□□□□ -1.34
TRAF3-205ENST00000558700 hCG_1807616A0A1W2PRN6 198 aa6.71□□□□□ -1.34
TRAF3-205ENST00000558700 ANKRD30BLA7E2S9 258 aa6.71□□□□□ -1.34
TRAF3-205ENST00000558700 LGALS8O00214 317 aa6.71□□□□□ -1.34
TRAF3-205ENST00000558700 NDUFA2O43678 99 aa6.71□□□□□ -1.34
TRAF3-205ENST00000558700 PTBP3O95758 552 aaKnown RBP6.71□□□□□ -1.34
TRAF3-205ENST00000558700 APOC1P02654 83 aa6.71□□□□□ -1.34
TRAF3-205ENST00000558700 GYPBP06028 91 aa6.71□□□□□ -1.34
TRAF3-205ENST00000558700 LPLP06858 475 aa6.71□□□□□ -1.34
TRAF3-205ENST00000558700 IGHV4-38-2P0DP08 117 aa6.71□□□□□ -1.34
TRAF3-205ENST00000558700 SPI1P17947 270 aa6.71□□□□□ -1.34
TRAF3-205ENST00000558700 CFL1P23528 166 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms