RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 TSPAN2O60636 221 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 DIRAS3O95661 229 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 TXNDC12O95881 172 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 FAM157BP0CG42 384 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 PLAURQ03405 335 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 NAXDQ8IW45 347 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 NOXO1Q8NFA2 376 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 SYNGR4O95473 234 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 CD1AP06126 327 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 PATE4P0C8F1 98 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 PRKACAP17612 351 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 ACTBL2Q562R1 376 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 C20orf196Q8IYI0 205 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 SVBPQ8N300 66 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 D2HGDHQ8N465 521 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 SUMF1Q8NBK3 374 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 SLC25A43Q8WUT9 341 aaPredicted RBP13.76□□□□□ -0.21
AP4E1-202ENST00000558439 PAPOLGQ9BWT3 736 aaKnown RBP13.76□□□□□ -0.21
AP4E1-202ENST00000558439 A0A1W2PP11 408 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 SGCEO43556 437 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 DXOO77932 396 aaKnown RBP13.76□□□□□ -0.21
AP4E1-202ENST00000558439 ZNF205O95201 554 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 EPHA1P21709 976 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 C2orf68Q2NKX9 166 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 ZNF100Q8IYN0 542 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 MAML2Q8IZL2 1156 aaPredicted RBP13.76□□□□□ -0.21
AP4E1-202ENST00000558439 SPEM1Q8N4L4 309 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 CLEC1AQ8NC01 280 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 GFI1Q99684 422 aa13.76□□□□□ -0.21
AP4E1-202ENST00000558439 C9orf170A2RU37 121 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 ENPP1P22413 925 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 GLRA1P23415 457 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 SSBP1Q04837 148 aaKnown RBP13.75□□□□□ -0.21
AP4E1-202ENST00000558439 FZD5Q13467 585 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 SMAD4Q13485 552 aaKnown RBP13.75□□□□□ -0.21
AP4E1-202ENST00000558439 HSD17B11Q8NBQ5 300 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 BHLHE23Q8NDY6 225 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 CADM4Q8NFZ8 388 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 OR2AE1Q8NHA4 323 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 ALKBH3Q96Q83 286 aaPredicted RBP13.75□□□□□ -0.21
AP4E1-202ENST00000558439 ZNF416Q9BWM5 594 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 RPS10P5Q9NQ39 176 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 BPTFQ12830 3046 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 A0A1W2PQD3 144 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 OR5H15A6NDH6 313 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 MBTPS2O43462 519 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 SPRY1O43609 319 aaPredicted RBP13.75□□□□□ -0.21
AP4E1-202ENST00000558439 EIF1BO60739 113 aaKnown RBP13.75□□□□□ -0.21
AP4E1-202ENST00000558439 VSIG8P0DPA2 414 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 RGS19P49795 217 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 SCAND1P57086 179 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 IGLV3-21P80748 117 aaPredicted RBP13.75□□□□□ -0.21
AP4E1-202ENST00000558439 MALLQ13021 153 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 H3F3CQ6NXT2 135 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 PLXNA2O75051 1894 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 IGLV1-36A0A0B4J1U3 117 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 LIPT2A6NK58 231 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 TNFSF11O14788 317 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 TCN2P20062 427 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 RHBDD2Q6NTF9 364 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 OR8B12Q8NGG6 310 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 AKR7LQ8NHP1 331 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 PRMT8Q9NR22 394 aaPredicted RBP13.75□□□□□ -0.21
AP4E1-202ENST00000558439 HMSDA8MTL9 139 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 FOXK1P85037 733 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 CNN3Q15417 329 aaKnown RBP13.75□□□□□ -0.21
AP4E1-202ENST00000558439 SP6Q3SY56 376 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 TRIM61Q5EBN2 209 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 DEGS2Q6QHC5 323 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 ZNF813Q6ZN06 617 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 OR2W3Q7Z3T1 314 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 BAP18Q8IXM2 172 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 OR5L1Q8NGL2 311 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 IL1F10Q8WWZ1 152 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 SLC25A32Q9H2D1 315 aa13.75□□□□□ -0.21
AP4E1-202ENST00000558439 TRBV5-7A0A0A0MS05 114 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 DHHO43323 396 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 CXCL13O43927 109 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 NXPH3O95157 252 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 B4GALT1P15291 398 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 CSF2RBP32927 897 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 GALNSP34059 522 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 LTBRP36941 435 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 RAB2AP61019 212 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 KISS1Q15726 138 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 PAN3Q58A45 887 aaKnown RBP13.74□□□□□ -0.21
AP4E1-202ENST00000558439 TMPPEQ6ZT21 453 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 MRPL21Q7Z2W9 205 aaKnown RBP13.74□□□□□ -0.21
AP4E1-202ENST00000558439 KMT5CQ86Y97 462 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 KCNRGQ8N5I3 272 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 SEMA6DQ8NFY4 1073 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 IFI44Q8TCB0 444 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 SECTM1Q8WVN6 248 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 ROBO4Q8WZ75 1007 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 TMPRSS13Q9BYE2 586 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 C1orf123Q9NWV4 160 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 KLK13Q9UKR3 277 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 LOC101059948A0A1B0GTJ6 334 aa13.74□□□□□ -0.21
AP4E1-202ENST00000558439 CNOT4O95628 575 aaKnown RBP13.74□□□□□ -0.21
AP4E1-202ENST00000558439 SNRNP70P08621 437 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms