RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 BIDP55957 195 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 FBXW4P57775 412 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 ZNF813Q6ZN06 617 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 PHF7Q9BWX1 381 aaPredicted RBP10.94□□□□□ -0.66
LDLR-205ENST00000557933 TXNIPQ9H3M7 391 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 UBE2ZQ9H832 354 aaPredicted RBP10.94□□□□□ -0.66
LDLR-205ENST00000557933 PRODH2Q9UF12 536 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 IGKV1D-8A0A087WSZ0 117 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 A0A1W2PNR3 127 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 PRAMEF26H0Y7S4 382 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 PLPP3O14495 311 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 LDLRAD4O15165 306 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 AHSA1O95433 338 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 SPINK2P20155 84 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 AKT2P31751 481 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 NOVA1P51513 510 aaKnown RBP10.94□□□□□ -0.66
LDLR-205ENST00000557933 SUPT4H1P63272 117 aaKnown RBP10.94□□□□□ -0.66
LDLR-205ENST00000557933 FAM209BQ5JX69 171 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 ADAM5Q6NVV9 412 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 C20orf196Q8IYI0 205 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 APCDD1LQ8NCL9 501 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 ST7LQ8TDW4 575 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 C11orf40Q8WZ69 217 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 DYRK2Q92630 601 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 SLAMF6Q96DU3 332 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 GABRG3Q99928 467 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 SULT4A1Q9BR01 284 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 RHBDD3Q9Y3P4 386 aa10.94□□□□□ -0.66
LDLR-205ENST00000557933 RALGAPA1Q6GYQ0 2036 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 A0A1W2PPH5 198 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 TMEM150CB9EJG8 249 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 E9PLN8 166 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 DUS4LO95620 317 aaKnown RBP10.93□□□□□ -0.66
LDLR-205ENST00000557933 DIRAS3O95661 229 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 S100A6P06703 90 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 NQO2P16083 231 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 AMY2BP19961 511 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 SERPINA2P20848 420 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 FZD2Q14332 565 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 HABP2Q14520 560 aaPredicted RBP10.93□□□□□ -0.66
LDLR-205ENST00000557933 SGCBQ16585 318 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 Q6ZRG5 221 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 DTX1Q86Y01 620 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 SLC43A2Q8N370 569 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 OR1M1Q8NGA1 313 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 RAB3CQ96E17 227 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 JSRP1Q96MG2 331 aaPredicted RBP10.93□□□□□ -0.66
LDLR-205ENST00000557933 LRRC61Q9BV99 259 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 PBOV1Q9GZY1 135 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 ADAM19Q9H013 955 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 EHFQ9NZC4 300 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 A0A0A6YYH2 397 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 A6NJ64 397 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 PRSS44E7EML9 344 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 RNASEK-C17orf49H0YIS7 233 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 SNAPINO95295 136 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 RORAP35398 523 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 TMEM50BP56557 158 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 MEF2DQ14814 521 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 NCMAPQ5T1S8 102 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 OR10S1Q8NGN2 331 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 LMX1AQ8TE12 382 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 TOMM40LQ969M1 308 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 TAF9BQ9HBM6 251 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 RCC2Q9P258 522 aaKnown RBP10.93□□□□□ -0.66
LDLR-205ENST00000557933 ASH2LQ9UBL3 628 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 LPAR3Q9UBY5 353 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 MRPS28Q9Y2Q9 187 aaKnown RBP10.93□□□□□ -0.66
LDLR-205ENST00000557933 THADAQ6YHU6 1953 aa10.93□□□□□ -0.66
LDLR-205ENST00000557933 RAMP1O60894 148 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 ZNF20P17024 532 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 GABRG2P18507 467 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 DRD1P21728 446 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 CSNK2A1P68400 391 aaPredicted RBP10.92□□□□□ -0.66
LDLR-205ENST00000557933 TLE3Q04726 772 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 PJVKQ0ZLH3 352 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 CHAF1BQ13112 559 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 CSNK2A3Q8NEV1 391 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 OR10H5Q8NGA6 315 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 OR5T2Q8NGG2 359 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 TERB2Q8NHR7 220 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 PMM1Q92871 262 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 GPHA2Q96T91 129 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 PDE7BQ9NP56 450 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 SUSD2Q9UGT4 822 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 PIAS3Q9Y6X2 628 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 DOCK7Q96N67 2140 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 TEX13DA0A0J9YY54 714 aaPredicted RBP10.92□□□□□ -0.66
LDLR-205ENST00000557933 ZNF878C9JN71 531 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 NXPH3O95157 252 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 NSA2O95478 260 aaKnown RBP10.92□□□□□ -0.66
LDLR-205ENST00000557933 DDAH2O95865 285 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 IGHV4-34P06331 123 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 SFTPDP35247 375 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 OR3A2P47893 321 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 ROM1Q03395 351 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 C14orf28Q4W4Y0 310 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 FAM76BQ5HYJ3 339 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 C5orf24Q7Z6I8 188 aa10.92□□□□□ -0.66
LDLR-205ENST00000557933 FAM24BQ8N5W8 94 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms