RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ST3GAL4Q11206 333 aa21.7■■□□□ 1.06
SMAD6-202ENST00000557916 TNK1Q13470 666 aa21.7■■□□□ 1.06
SMAD6-202ENST00000557916 SNCBQ16143 134 aa21.7■■□□□ 1.06
SMAD6-202ENST00000557916 TGIF2LYQ8IUE0 185 aa21.7■■□□□ 1.06
SMAD6-202ENST00000557916 EGFL6Q8IUX8 553 aa21.7■■□□□ 1.06
SMAD6-202ENST00000557916 ZNF786Q8N393 782 aa21.7■■□□□ 1.06
SMAD6-202ENST00000557916 RDH5Q92781 318 aa21.7■■□□□ 1.06
SMAD6-202ENST00000557916 SLC22A4Q9H015 551 aa21.7■■□□□ 1.06
SMAD6-202ENST00000557916 ISG20L2Q9H9L3 353 aaKnown RBP21.7■■□□□ 1.06
SMAD6-202ENST00000557916 A0A1B0GWJ7 208 aa21.69■■□□□ 1.06
SMAD6-202ENST00000557916 MLNRO43193 412 aa21.69■■□□□ 1.06
SMAD6-202ENST00000557916 HLA-DPB1P04440 258 aa21.69■■□□□ 1.06
SMAD6-202ENST00000557916 CA6P23280 308 aa21.69■■□□□ 1.06
SMAD6-202ENST00000557916 COL8A2P25067 703 aa21.69■■□□□ 1.06
SMAD6-202ENST00000557916 ETV1P50549 477 aa21.69■■□□□ 1.06
SMAD6-202ENST00000557916 OR8B8Q15620 311 aa21.69■■□□□ 1.06
SMAD6-202ENST00000557916 CSNK2A3Q8NEV1 391 aa21.69■■□□□ 1.06
SMAD6-202ENST00000557916 RNF166Q96A37 237 aaPredicted RBP21.69■■□□□ 1.06
SMAD6-202ENST00000557916 PELI1Q96FA3 418 aa21.69■■□□□ 1.06
SMAD6-202ENST00000557916 IL19Q9UHD0 177 aa21.69■■□□□ 1.06
SMAD6-202ENST00000557916 EXOSC1Q9Y3B2 195 aaKnown RBP21.69■■□□□ 1.06
SMAD6-202ENST00000557916 LOC390937A0A1W2PQ73 354 aa21.68■■□□□ 1.06
SMAD6-202ENST00000557916 TRIM64A6NGJ6 449 aa21.68■■□□□ 1.06
SMAD6-202ENST00000557916 TRIM64BA6NI03 449 aa21.68■■□□□ 1.06
SMAD6-202ENST00000557916 ANKRD30BLA7E2S9 258 aa21.68■■□□□ 1.06
SMAD6-202ENST00000557916 IGLV3-1P01715 115 aa21.68■■□□□ 1.06
SMAD6-202ENST00000557916 MYL12AP19105 171 aa21.68■■□□□ 1.06
SMAD6-202ENST00000557916 MRPS11P82912 194 aaKnown RBP21.68■■□□□ 1.06
SMAD6-202ENST00000557916 SPRNQ5BIV9 151 aa21.68■■□□□ 1.06
SMAD6-202ENST00000557916 AHSA2Q719I0 299 aa21.68■■□□□ 1.06
SMAD6-202ENST00000557916 PRSS35Q8N3Z0 413 aa21.68■■□□□ 1.06
SMAD6-202ENST00000557916 ZNF540Q8NDQ6 660 aa21.68■■□□□ 1.06
SMAD6-202ENST00000557916 C10orf105Q8TEF2 133 aa21.68■■□□□ 1.06
SMAD6-202ENST00000557916 FAM71F1Q96KD3 344 aaPredicted RBP21.68■■□□□ 1.06
SMAD6-202ENST00000557916 CNBD2Q96M20 576 aa21.68■■□□□ 1.06
SMAD6-202ENST00000557916 CHCHD3Q9NX63 227 aaKnown RBP21.68■■□□□ 1.06
SMAD6-202ENST00000557916 NOP16Q9Y3C1 178 aaKnown RBP21.68■■□□□ 1.06
SMAD6-202ENST00000557916 P2RY10O00398 339 aa21.67■■□□□ 1.06
SMAD6-202ENST00000557916 CDC14BO60729 498 aa21.67■■□□□ 1.06
SMAD6-202ENST00000557916 HTR1AP08908 422 aa21.67■■□□□ 1.06
SMAD6-202ENST00000557916 ACKR3P25106 362 aa21.67■■□□□ 1.06
SMAD6-202ENST00000557916 CRYBB2P43320 205 aa21.67■■□□□ 1.06
SMAD6-202ENST00000557916 MVKQ03426 396 aa21.67■■□□□ 1.06
SMAD6-202ENST00000557916 MED21Q13503 144 aa21.67■■□□□ 1.06
SMAD6-202ENST00000557916 OR8G1Q15617 311 aa21.67■■□□□ 1.06
SMAD6-202ENST00000557916 ODF4Q2M2E3 257 aa21.67■■□□□ 1.06
SMAD6-202ENST00000557916 WDR38Q5JTN6 314 aa21.67■■□□□ 1.06
SMAD6-202ENST00000557916 STX19Q8N4C7 294 aa21.67■■□□□ 1.06
SMAD6-202ENST00000557916 OR2G2Q8NGZ5 317 aa21.67■■□□□ 1.06
SMAD6-202ENST00000557916 YIPF5Q969M3 257 aa21.67■■□□□ 1.06
SMAD6-202ENST00000557916 OR2V2Q96R30 315 aa21.67■■□□□ 1.06
SMAD6-202ENST00000557916 CELSR1Q9NYQ6 3014 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 IGHV4-30-2A0A087WSY4 118 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 IGHV1-69-2A0A0G2JMI3 117 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 F5H5P2 479 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 NDUFS8O00217 210 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 SLC1A7O00341 560 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 GMDSO60547 372 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 ATP6V1B1P15313 513 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 TNFRSF1AP19438 455 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 MAP2K3P46734 347 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 FDX2Q6P4F2 183 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 FTMTQ8N4E7 242 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 ITLN1Q8WWA0 313 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 ITFG2Q969R8 447 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 ADAT1Q9BUB4 502 aaKnown RBP21.66■■□□□ 1.06
SMAD6-202ENST00000557916 RASSF4Q9H2L5 321 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 FKBP14Q9NWM8 211 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 SCN3BQ9NY72 215 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 CAB39Q9Y376 341 aaPredicted RBP21.66■■□□□ 1.06
SMAD6-202ENST00000557916 RHBDD3Q9Y3P4 386 aa21.66■■□□□ 1.06
SMAD6-202ENST00000557916 A0A1B0GTI1 187 aa21.65■■□□□ 1.06
SMAD6-202ENST00000557916 MTRF1O75570 445 aaKnown RBP21.65■■□□□ 1.06
SMAD6-202ENST00000557916 ACHEP22303 614 aa21.65■■□□□ 1.06
SMAD6-202ENST00000557916 KIR3DL2P43630 455 aa21.65■■□□□ 1.06
SMAD6-202ENST00000557916 SRP9P49458 86 aaKnown RBP21.65■■□□□ 1.06
SMAD6-202ENST00000557916 GBX2P52951 348 aaPredicted RBP21.65■■□□□ 1.06
SMAD6-202ENST00000557916 NANOS3P60323 173 aaKnown RBP21.65■■□□□ 1.06
SMAD6-202ENST00000557916 TMPRSS11AQ6ZMR5 421 aa21.65■■□□□ 1.06
SMAD6-202ENST00000557916 KLHL36Q8N4N3 616 aa21.65■■□□□ 1.06
SMAD6-202ENST00000557916 PIMREGQ9BSJ6 248 aa21.65■■□□□ 1.06
SMAD6-202ENST00000557916 DLL4Q9NR61 685 aa21.65■■□□□ 1.06
SMAD6-202ENST00000557916 FRRS1LQ9P0K9 344 aa21.65■■□□□ 1.06
SMAD6-202ENST00000557916 CLEC2DQ9UHP7 191 aa21.65■■□□□ 1.06
SMAD6-202ENST00000557916 CHD3Q12873 2000 aaKnown RBP21.65■■□□□ 1.06
SMAD6-202ENST00000557916 PTGES3LE9PB15 166 aa21.64■■□□□ 1.06
SMAD6-202ENST00000557916 MRPL28Q13084 256 aaKnown RBP21.64■■□□□ 1.06
SMAD6-202ENST00000557916 DOK3Q7L591 496 aa21.64■■□□□ 1.06
SMAD6-202ENST00000557916 KLBQ86Z14 1044 aa21.64■■□□□ 1.06
SMAD6-202ENST00000557916 PLPP7Q8NBV4 271 aa21.64■■□□□ 1.06
SMAD6-202ENST00000557916 SEMA6DQ8NFY4 1073 aa21.64■■□□□ 1.06
SMAD6-202ENST00000557916 DVL3Q92997 716 aaPredicted RBP21.64■■□□□ 1.06
SMAD6-202ENST00000557916 MEGF10Q96KG7 1140 aa21.64■■□□□ 1.06
SMAD6-202ENST00000557916 PAPOLGQ9BWT3 736 aaKnown RBP21.64■■□□□ 1.06
SMAD6-202ENST00000557916 Q9H521 79 aa21.64■■□□□ 1.06
SMAD6-202ENST00000557916 CHODLQ9H9P2 273 aa21.64■■□□□ 1.06
SMAD6-202ENST00000557916 DHRS3O75911 302 aa21.63■■□□□ 1.05
SMAD6-202ENST00000557916 SLC25A16P16260 332 aa21.63■■□□□ 1.05
SMAD6-202ENST00000557916 GIFP27352 417 aa21.63■■□□□ 1.05
SMAD6-202ENST00000557916 C21orf33P30042 268 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms