RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 MOB1AQ9H8S9 216 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 MED29Q9NX70 200 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 GSKIPQ9P0R6 139 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 PCDHGA1Q9Y5H4 931 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 POMT1Q9Y6A1 747 aa10.48□□□□□ -0.73
VIPAS39-211ENST00000557658 TLCD2A6NGC4 264 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 FBXO24O75426 580 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 EIF3GO75821 320 aaKnown RBP eCLIP10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 DRD1P21728 446 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 BCKDHBP21953 392 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 NME2P22392 152 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 PAX6P26367 422 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 FASLGP48023 281 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 SULT1A2P50226 295 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 TLE3Q04726 772 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 ARFRP1Q13795 201 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 KIAA0895LQ68EN5 471 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 FAM109BQ6ICB4 259 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 COMMD2Q86X83 199 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 WDFY1Q8IWB7 410 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 C5orf34Q96MH7 638 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 SULT4A1Q9BR01 284 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 BANF2Q9H503 90 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 CHST11Q9NPF2 352 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 C1orf196B1AJZ1 125 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 LINC01565O15544 149 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 RAD51DO75771 328 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 SERPINA5P05154 406 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 FCGR3AP08637 254 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 CD80P33681 288 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 CCR5P51681 352 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 TMEM50BP56557 158 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 NSDHLQ15738 373 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 BTNL8Q6UX41 500 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 LHFPL1Q86WI0 220 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 OR5AS1Q8N127 324 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 OR1N1Q8NGS0 311 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 OR13G1Q8NGZ3 307 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 C1orf147Q96MC9 270 aaPredicted RBP10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 URM1Q9BTM9 101 aaKnown RBP10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 PARP11Q9NR21 331 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 EDARQ9UNE0 448 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 TRANK1O15050 2925 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 CDH23Q9H251 3354 aa10.47□□□□□ -0.73
VIPAS39-211ENST00000557658 LILRA5A6NI73 299 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 FIGNL2A6NMB9 653 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 ZNF354AO60765 605 aaPredicted RBP10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 CST4P01036 141 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 HOXB5P09067 269 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 PTAFRP25105 342 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 OR3A4PP47883 348 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 DVL1P1P54792 670 aaPredicted RBP10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 F2RL1P55085 397 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 TAS2R46P59540 309 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 SNRPEP62304 92 aaKnown RBP10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 IL15RAQ13261 267 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 RBM39Q14498 530 aaKnown RBP10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 HABP2Q14520 560 aaPredicted RBP10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 RNF144BQ7Z419 303 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 OR10S1Q8NGN2 331 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 ST8SIA1Q92185 356 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 KLHDC7BQ96G42 594 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 ARHGAP5-AS1Q96IT6 56 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 ARL5BQ96KC2 179 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 OR5B2Q96R09 309 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 GPR27Q9NS67 375 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 ASH2LQ9UBL3 628 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 OSGIN2Q9Y236 505 aa10.46□□□□□ -0.73
VIPAS39-211ENST00000557658 C10orf142B7Z368 130 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 AGPAT2O15120 278 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 CRTAPO75718 401 aaPredicted RBP10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 HTR3BO95264 441 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 S100A8P05109 93 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 S100A9P06702 114 aaKnown RBP10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 SFTPBP07988 381 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 HCKP08631 526 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 ACAA1P09110 424 aaPredicted RBP10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 HKR1P10072 659 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 RCC1P18754 421 aaPredicted RBP10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 LAP3P28838 519 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 P2RY4P51582 365 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 BIDP55957 195 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 ECH1Q13011 328 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 SMCO1Q147U7 214 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 HMGN3Q15651 99 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 ABHD12BQ7Z5M8 362 aaPredicted RBP10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF441Q8N8Z8 693 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 RHBDD1Q8TEB9 315 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 MVB12AQ96EY5 273 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 C14orf79Q96F83 325 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 KIRREL1Q96J84 757 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 GPER1Q99527 375 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 EGLN1Q9GZT9 426 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 CHRNA10Q9GZZ6 450 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 UCK1Q9HA47 277 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 B3GALT5Q9Y2C3 310 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 POLR1DQ9Y2S0 133 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 KPTNQ9Y664 436 aa10.46□□□□□ -0.74
VIPAS39-211ENST00000557658 ANKUB1A6NFN9 424 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms