RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 ARFGEF3Q5TH69 2177 aa10.76□□□□□ -0.69
SHMT2-230ENST00000557427 TRAV1-2A0A0B4J238 106 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 TRBV2A0A0J9YWF9 115 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 LOC102725191A0A1B0GVB3 256 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 ANKRD61A6NGH8 418 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 ZNF726A6NNF4 738 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 CENPBD1B2RD01 187 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 H7C1C5 153 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 NDUFS8O00217 210 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 PFDN1O60925 122 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 ARL6IP5O75915 188 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 ZNF432O94892 652 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 FABP6P51161 128 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 DAP3P51398 398 aaKnown RBP10.75□□□□□ -0.69
SHMT2-230ENST00000557427 DEFA1P59665 94 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 DEFA3P59666 94 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 UBE2NP61088 152 aaKnown RBP10.75□□□□□ -0.69
SHMT2-230ENST00000557427 LCN6P62502 163 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 POU3F1Q03052 451 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-230ENST00000557427 CAMK2DQ13557 499 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 INSL4Q14641 139 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 TBRG1Q3YBR2 411 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 ACSM3Q53FZ2 586 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 PHYHD1Q5SRE7 291 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 STEAP3Q658P3 488 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 LYPD4Q6UWN0 246 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 UNQ9370/PRO34162Q6UXP9 181 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 FAM220AQ7Z4H9 259 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 CEACAM19Q7Z692 300 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 SNX29P2Q8IUI4 249 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 C17orf78Q8N4C9 275 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 ASB10Q8WXI3 467 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 ZNF837Q96EG3 531 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-230ENST00000557427 OR2M2Q96R28 347 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 INTS14Q96SY0 518 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 ZNF747Q9BV97 191 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 LINC00470Q9BZP3 86 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 BPESC1Q9GZL8 116 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 METTL17Q9H7H0 456 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-230ENST00000557427 CRLF2Q9HC73 371 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 GPR35Q9HC97 309 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 ACOXLQ9NUZ1 547 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 ADAM30Q9UKF2 790 aa10.75□□□□□ -0.69
SHMT2-230ENST00000557427 IGLV1-36A0A0B4J1U3 117 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 SLC22A23A1A5C7 686 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 MAGEB4O15481 346 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-230ENST00000557427 TRAF3IP2O43734 574 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-230ENST00000557427 ABHD16AO95870 558 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 PTTG1O95997 202 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 KRT8P05787 483 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 ALOX5APP20292 161 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 CRABP1P29762 137 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 RPS11P62280 158 aaKnown RBP eCLIP10.74□□□□□ -0.69
SHMT2-230ENST00000557427 ZNF79Q15937 498 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 MST1LQ2TV78 715 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 CEACAM16Q2WEN9 425 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 ZMAT1Q5H9K5 638 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 ANKRD16Q6P6B7 361 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 DNM1P34Q6PK57 102 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 WDFY1Q8IWB7 410 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 GDPD1Q8N9F7 314 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 SETD6Q8TBK2 473 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 ASB17Q8WXJ9 295 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 SORCS2Q96PQ0 1159 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 TTTY10Q9BZA0 68 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 SRRQ9GZT4 340 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 LAMP5Q9UJQ1 280 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 RCE1Q9Y256 329 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 KLHDC2Q9Y2U9 406 aa10.74□□□□□ -0.69
SHMT2-230ENST00000557427 ARPC4-TTLL3A0A0A6YYG9 625 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 FUOMA2VDF0 154 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 SMIM30A4D0T7 59 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 TVP23AA6NH52 213 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 PRR32B1ATL7 298 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 TMEM127O75204 238 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 UCHL1P09936 223 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 IFNGR1P15260 489 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 BCAP31P51572 246 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 CAV3P56539 151 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 RIN1Q13671 783 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 YIF1BQ5BJH7 314 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 FAM131AQ6UXB0 335 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 NHLRC1Q6VVB1 395 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 C20orf196Q8IYI0 205 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 TMEM123Q8N131 208 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 OR6N1Q8NGY5 312 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 OR6N2Q8NGY6 317 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 OTOSQ8NHW6 89 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 RNF166Q96A37 237 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-230ENST00000557427 DIRAS2Q96HU8 199 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 SOSTQ9BQB4 213 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 PPIL3Q9H2H8 161 aaKnown RBP10.73□□□□□ -0.69
SHMT2-230ENST00000557427 ZCCHC4Q9H5U6 513 aa10.73□□□□□ -0.69
SHMT2-230ENST00000557427 MRM2Q9UI43 246 aaKnown RBP10.73□□□□□ -0.69
SHMT2-230ENST00000557427 HEATR1Q9H583 2144 aaKnown RBP10.72□□□□□ -0.69
SHMT2-230ENST00000557427 IGHV1-18A0A0C4DH31 117 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 LOC390937A0A1W2PQ73 354 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 FABP12A6NFH5 140 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 ZNF879B4DU55 563 aa10.72□□□□□ -0.69
SHMT2-230ENST00000557427 ATP6V1G2-DDX39BF2Z307 99 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms