RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 AICDAQ9GZX7 198 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 VCX3BQ9H321 246 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 TCEAL2Q9H3H9 227 aaPredicted RBP2.42□□□□□ -2.02
VRK1-207ENST00000557352 TMEM38AQ9H6F2 299 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 CMTM6Q9NX76 183 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 GIN1Q9NXP7 522 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 TAS2R9Q9NYW1 312 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 SLC25A37Q9NYZ2 338 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 VAPAQ9P0L0 249 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 GHRLQ9UBU3 117 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 ZNF639Q9UID6 485 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 CES1P1Q9UKY3 287 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 PSME2Q9UL46 239 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 L3MBTL1Q9Y468 752 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 ASB4Q9Y574 426 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 SLCO1B1Q9Y6L6 691 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 USP34Q70CQ2 3546 aa2.42□□□□□ -2.02
VRK1-207ENST00000557352 ZNF407Q9C0G0 2248 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 MYO7BQ6PIF6 2116 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 PHF3Q92576 2039 aaKnown RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 IGHV1OR21-1A0A087WYE8 117 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 DHRS12A0PJE2 317 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 GSAPA4D1B5 854 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 OR6C74A6NCV1 312 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 WASHC1A8K0Z3 465 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 C4orf51C9J302 202 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 ANKRD65E5RJM6 399 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 H0YGG7 62 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 H3BTX0 84 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 LGALS8O00214 317 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 ERI3O43414 337 aaKnown RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 SDC3O75056 442 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 GPX5O75715 221 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 AK1P00568 194 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 SEMG1P04279 462 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 HPNP05981 417 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 KLK1P06870 262 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 IL3P08700 152 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 ETS2P15036 469 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 NELFEP18615 380 aaKnown RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 NTSP30990 170 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 MPIP34949 423 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 RORAP35398 523 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 RBMXP38159 391 aaKnown RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 VHLP40337 213 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 SSR2P43308 183 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 HSPA13P48723 471 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 CSNK1EP49674 416 aaKnown RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 DUSP3P51452 185 aaPredicted RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 RAB38P57729 211 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 SLC26A5P58743 744 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 HBA1P69905 142 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 PSPHP78330 225 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 TNFRSF17Q02223 184 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 ZNF45Q02386 682 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 TLE4Q04727 773 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 LIPEQ05469 1076 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 ILKQ13418 452 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 DDX39BQ13838 428 aaKnown RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 GNA13Q14344 377 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 RAB35Q15286 201 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 RCN1Q15293 331 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 RGNQ15493 299 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 NDUFA9Q16795 377 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 ZNF630Q2M218 657 aaPredicted RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 TOR1AIP1Q5JTV8 583 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 OGFRL1Q5TC84 451 aaPredicted RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 ZNF691Q5VV52 312 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 SAXO2Q658L1 398 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 OR4F3Q6IEY1 312 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 ADNP2Q6IQ32 1131 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 C9orf40Q8IXQ3 194 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 MICU2Q8IYU8 434 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 SLC25A45Q8N413 288 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 ZNF561Q8N587 486 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 KRTCAP2Q8N6L1 136 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 CSNK1A1LQ8N752 337 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 PACRGLQ8N7B6 248 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 TMEM105Q8N8V8 129 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 ACOT4Q8N9L9 421 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 BBS1Q8NFJ9 593 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 OR10H4Q8NGA5 316 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 OR4D9Q8NGE8 314 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 LMX1AQ8TE12 382 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 ADAMTS16Q8TE57 1224 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 RASSF5Q8WWW0 418 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 PATE1Q8WXA2 126 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 SLC35B4Q969S0 331 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 RERGQ96A58 199 aaPredicted RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 PINX1Q96BK5 328 aaKnown RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 DNAJA3Q96EY1 480 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 NRBF2Q96F24 287 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 ZNF681Q96N22 645 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 RDH12Q96NR8 316 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 AMDHD1Q96NU7 426 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 PANX1Q96RD7 426 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 KCTD14Q9BQ13 255 aaPredicted RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 ECSITQ9BQ95 431 aa2.41□□□□□ -2.02
VRK1-207ENST00000557352 PELOQ9BRX2 385 aaKnown RBP2.41□□□□□ -2.02
VRK1-207ENST00000557352 EBPLQ9BY08 206 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms