RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SOWAHBA6NEL2 793 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 KCNAB3O43448 404 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 ZBTB25P24278 435 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 IVDP26440 423 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 LMAN2Q12907 356 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 SLC5A12Q1EHB4 618 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 MIDNQ504T8 468 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 AGBL5Q8NDL9 886 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 CTRCQ99895 268 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 MAP1LC3B2A6NCE7 125 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 MFNGO00587 321 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 RPS4Y1P22090 263 aaKnown RBP8.05□□□□□ -1.12
SYNE3-205ENST00000557275 PMCHL1Q16048 86 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 LIPIQ6XZB0 460 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 APIPQ96GX9 242 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 OR8B4Q96RC9 309 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 MAP1LC3BQ9GZQ8 125 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 RGPD8O14715 1765 aaPredicted RBP8.05□□□□□ -1.12
SYNE3-205ENST00000557275 UBE2L5PA0A1B0GUS4 154 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 MT-ND6P03923 174 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 SMPD1P17405 629 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 ACP1P24666 158 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 FAHD2BQ6P2I3 314 aaPredicted RBP8.05□□□□□ -1.12
SYNE3-205ENST00000557275 OR52I1Q8NGK6 324 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 OR5R1Q8NH85 324 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 FAHD2AQ96GK7 314 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 EGLN2Q96KS0 407 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 ULBP3Q9BZM4 244 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 SH2D2AQ9NP31 389 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 UQCC1Q9NVA1 299 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 PIPOXQ9P0Z9 390 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 TIMM10BQ9Y5J6 103 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 SPG11Q96JI7 2443 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 MYO5AQ9Y4I1 1855 aaKnown RBP8.05□□□□□ -1.12
SYNE3-205ENST00000557275 IGLV3-22A0A075B6J6 115 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 GAGE10A6NGK3 116 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 OOEPA6NGQ2 149 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 G3V2L1 256 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 SYNGR2O43760 224 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 GPX3P22352 226 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 DCDP81605 110 aaKnown RBP8.05□□□□□ -1.12
SYNE3-205ENST00000557275 FOXK2Q01167 660 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 LRRC10Q5BKY1 277 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 PELI1Q96FA3 418 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 TRAV1-2A0A0B4J238 106 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 GYPAP02724 150 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 GUSBP08236 651 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 ELNP15502 786 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 RPL17P18621 184 aaKnown RBP8.05□□□□□ -1.12
SYNE3-205ENST00000557275 NEIL2Q969S2 332 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 STARD4Q96DR4 205 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 DCBLD2Q96PD2 775 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 ROS1P08922 2347 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 ZC3H12DA2A288 527 aaKnown RBP8.05□□□□□ -1.12
SYNE3-205ENST00000557275 NCR1O76036 304 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 TNFRSF1AP19438 455 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 CLN3Q13286 438 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 VSTM2AQ8TAG5 236 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 C12orf42Q96LP6 360 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 PMCHL2Q9BQD1 86 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 TRBV4-1A0A0J9YWV2 114 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 PIAS2O75928 621 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 NAT1P18440 290 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 CLDN18P56856 261 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 OR1D5P58170 312 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 HTRA3P83110 453 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 ZNF813Q6ZN06 617 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 SLC38A5Q8WUX1 472 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 SMIM4Q8WVI0 70 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 IGSF5Q9NSI5 407 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 RCL1Q9Y2P8 373 aaKnown RBP8.05□□□□□ -1.12
SYNE3-205ENST00000557275 ADRA1AP35348 466 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 SEMG2Q02383 582 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 FADS6Q8N9I5 356 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 ORM2P19652 201 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 TAZQ16635 292 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 PDPNQ86YL7 162 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 KIAA1958Q8N8K9 716 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 PCNPQ8WW12 178 aaKnown RBP8.05□□□□□ -1.12
SYNE3-205ENST00000557275 TIAM2Q8IVF5 1701 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 PRELID3AQ96N28 172 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 ANKRD61A6NGH8 418 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 BRS3P32247 399 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 PPP1CCP36873 323 aaKnown RBP8.05□□□□□ -1.12
SYNE3-205ENST00000557275 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.05□□□□□ -1.12
SYNE3-205ENST00000557275 PSG11Q9UQ72 335 aa8.05□□□□□ -1.12
SYNE3-205ENST00000557275 FIGNL2A6NMB9 653 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 LRP3O75074 770 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 LIPFP07098 398 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 HOXD13P35453 343 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 CLDN15P56746 228 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 AANATQ16613 207 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 GRASPQ7Z6J2 395 aaPredicted RBP8.04□□□□□ -1.12
SYNE3-205ENST00000557275 SPICQ8N5J4 248 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 TEX29Q8N6K0 151 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 OR4B1Q8NGF8 309 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 NQO2P16083 231 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 PAPPA-AS1Q5QFB9 102 aa8.04□□□□□ -1.12
SYNE3-205ENST00000557275 BCL7CQ8WUZ0 217 aaPredicted RBP8.04□□□□□ -1.12
SYNE3-205ENST00000557275 GPR78Q96P69 363 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms