RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 INAFM1C9JVW0 142 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 TMEM178BH3BS89 294 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 J3QRE1 110 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 CASQ2O14958 399 aaPredicted RBP9.01□□□□□ -0.97
LINC00239-201ENST00000556973 MAGEB4O15481 346 aaPredicted RBP9.01□□□□□ -0.97
LINC00239-201ENST00000556973 SRSF10O75494 262 aaKnown RBP9.01□□□□□ -0.97
LINC00239-201ENST00000556973 PTBP3O95758 552 aaKnown RBP9.01□□□□□ -0.97
LINC00239-201ENST00000556973 PNPP00491 289 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 IGHV2-70P01814 119 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 IRF2P14316 349 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 ATP6V1B1P15313 513 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 MAP2K3P46734 347 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 CDH15P55291 814 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 ACTC1P68032 377 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 ACTA1P68133 377 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 ELF3P78545 371 aaPredicted RBP9.01□□□□□ -0.97
LINC00239-201ENST00000556973 ZNF684Q5T5D7 378 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 TTC23Q5W5X9 447 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 FAM166AQ6J272 317 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 PLEKHG7Q6ZR37 379 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 SSX6Q7RTT6 188 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 KCTD20Q7Z5Y7 419 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 MOGAT3Q86VF5 341 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 LRRC28Q86X40 367 aaPredicted RBP9.01□□□□□ -0.97
LINC00239-201ENST00000556973 C1orf87Q8N0U7 546 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 YIPF7Q8N8F6 280 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 OR8S1Q8NH09 359 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 Q8TCH9 128 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 RAB39BQ96DA2 213 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 RNFT2Q96EX2 444 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 SIGLEC11Q96RL6 698 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 MYCBPQ99417 103 aaPredicted RBP9.01□□□□□ -0.97
LINC00239-201ENST00000556973 SOX7Q9BT81 388 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 NARFLQ9H6Q4 476 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 ZNF665Q9H7R5 613 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 MOB1AQ9H8S9 216 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 ABCB9Q9NP78 766 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 NUFIP1Q9UHK0 495 aaKnown RBP9.01□□□□□ -0.97
LINC00239-201ENST00000556973 EXOGQ9Y2C4 368 aaKnown RBP9.01□□□□□ -0.97
LINC00239-201ENST00000556973 MPC1Q9Y5U8 109 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 SNX5Q9Y5X3 404 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 R4GMQ9 66 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 ACANP16112 2415 aa9.01□□□□□ -0.97
LINC00239-201ENST00000556973 DAPL1A0PJW8 107 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 ISPDA4D126 451 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 ERICH4A6NGS2 130 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 LOC110117498-PIK3R3F6TDL0 507 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 LMX1BO60663 402 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 APOL3O95236 402 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 FSTL3O95633 263 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 CST4P01036 141 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 IGLV3-1P01715 115 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 TTRP02766 147 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 DBTP11182 482 aaKnown RBP9□□□□□ -0.97
LINC00239-201ENST00000556973 HOXB4P17483 251 aaPredicted RBP9□□□□□ -0.97
LINC00239-201ENST00000556973 PEX2P28328 305 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 GNALP38405 381 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 PMELP40967 661 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 BTG1P62324 171 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 IL5RAQ01344 420 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 ZNF85Q03923 595 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 MPPED2Q15777 294 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 TMEM155Q4W5P6 130 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 OGFRL1Q5TC84 451 aaPredicted RBP9□□□□□ -0.97
LINC00239-201ENST00000556973 LIPNQ5VXI9 398 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 KRT74Q7RTS7 529 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 EGFL6Q8IUX8 553 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 KLHL36Q8N4N3 616 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 DHRSXQ8N5I4 330 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 ACBD7Q8N6N7 88 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 OR11L1Q8NGX0 322 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 OR51E1Q8TCB6 317 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 PPP1R14AQ96A00 147 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 GAL3ST1Q99999 423 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 FN3KRPQ9HA64 309 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 G6PC2Q9NQR9 355 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 MRPS18AQ9NVS2 196 aaKnown RBP9□□□□□ -0.97
LINC00239-201ENST00000556973 DCAF16Q9NXF7 216 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 AASSQ9UDR5 926 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 OR52A1Q9UKL2 312 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 KCNS2Q9ULS6 477 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 PCDHB10Q9UN67 800 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 RHBDD3Q9Y3P4 386 aa9□□□□□ -0.97
LINC00239-201ENST00000556973 RPL36Q9Y3U8 105 aaKnown RBP9□□□□□ -0.97
LINC00239-201ENST00000556973 PPIAL4EA0A075B759 164 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 IGHV3-64DA0A0J9YX35 117 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 ANXA2P2A6NMY6 339 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 FAM157AC9JC47 383 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 PPIAL4DF5H284 164 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 CRLF1O75462 422 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 MTRF1O75570 445 aaKnown RBP8.99□□□□□ -0.97
LINC00239-201ENST00000556973 RPP14O95059 124 aaKnown RBP8.99□□□□□ -0.97
LINC00239-201ENST00000556973 FADS2O95864 444 aaKnown RBP8.99□□□□□ -0.97
LINC00239-201ENST00000556973 CYB5R3P00387 301 aaPredicted RBP8.99□□□□□ -0.97
LINC00239-201ENST00000556973 IGHV2-5P01817 119 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 GRPP07492 148 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 PPIAL4FP0DN26 164 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 ZNF16P17020 682 aaPredicted RBP8.99□□□□□ -0.97
LINC00239-201ENST00000556973 CPT2P23786 658 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 ACKR3P25106 362 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms