RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 EXO5Q9H790 373 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 ZNF703Q9H7S9 590 aaPredicted RBP8.87□□□□□ -0.99
TMEM260-211ENST00000556648 TMEM38BQ9NVV0 291 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 V9GYS6 101 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 ZNF736B4DX44 427 aaPredicted RBP8.87□□□□□ -0.99
TMEM260-211ENST00000556648 SOCS1O15524 211 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 ZNHIT1O43257 154 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 CDC14BO60729 498 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 IGHV3-9P01782 118 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 CD74P04233 296 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 ITGB2P05107 769 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 ERCC1P07992 297 aaPredicted RBP8.87□□□□□ -0.99
TMEM260-211ENST00000556648 LIPCP11150 499 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 CRYGSP22914 178 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 HTR2BP41595 481 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 SPEM2Q0P670 501 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 OR1C1Q15619 314 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 UBE2V2Q15819 145 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 PLAC9Q5JTB6 97 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 DCAF10Q5QP82 559 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 FAM27BQ5VT28 67 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 DCAF12L2Q5VW00 463 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 IDO2Q6ZQW0 420 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 PGAP1Q75T13 922 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 CDH24Q86UP0 819 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 SULF2Q8IWU5 870 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 MUC20Q8N307 709 aaPredicted RBP8.87□□□□□ -0.99
TMEM260-211ENST00000556648 MEIOBQ8N635 442 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 OR13C8Q8NGS7 320 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 OR10K1Q8NGX5 313 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 OR2AE1Q8NHA4 323 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 SNAPC3Q92966 411 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 PIGTQ969N2 578 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 INTS12Q96CB8 462 aaKnown RBP8.87□□□□□ -0.99
TMEM260-211ENST00000556648 HEXA-AS1Q9H8Q6 139 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 TMEM9BQ9NQ34 198 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 ZNF224Q9NZL3 707 aa8.87□□□□□ -0.99
TMEM260-211ENST00000556648 BOKQ9UMX3 212 aaPredicted RBP8.87□□□□□ -0.99
TMEM260-211ENST00000556648 METTL21EPA6NDL7 271 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 SNRPGP15A8MWD9 76 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 C21orf140B9A014 251 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 SGCEO43556 437 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 SYNGR3O43761 229 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 RAD51DO75771 328 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 DHRS3O75911 302 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 CYB5AP00167 134 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 CPN1P15169 458 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 ZNF32P17041 273 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 LHX2P50458 406 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 CEACAM16Q2WEN9 425 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 SCGB2B2Q4G0G5 96 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 ABHD17BQ5VST6 288 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 TMED4Q7Z7H5 227 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 CD163Q86VB7 1156 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 ZNF584Q8IVC4 421 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 GPR137CQ8N3F9 429 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 BPIFB2Q8N4F0 458 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 SPICQ8N5J4 248 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 UXS1Q8NBZ7 420 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 OR10R2Q8NGX6 335 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 MRGPRFQ96AM1 343 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 MED30Q96HR3 178 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 GPER1Q99527 375 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 FAM173AQ9BQD7 235 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 GPR87Q9BY21 358 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 GPN1Q9HCN4 374 aaPredicted RBP8.86□□□□□ -0.99
TMEM260-211ENST00000556648 EIF3KQ9UBQ5 218 aaKnown RBP8.86□□□□□ -0.99
TMEM260-211ENST00000556648 FBLN5Q9UBX5 448 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 PIGLQ9Y2B2 252 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 KCNK7Q9Y2U2 307 aa8.86□□□□□ -0.99
TMEM260-211ENST00000556648 LOC100509620A0A075B734 347 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 A0A0U1RQV5 110 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 TMEM82A0PJX8 343 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 GOSR2O14653 212 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 CYTIPO60759 359 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 CRTAPO75718 401 aaPredicted RBP8.85□□□□□ -0.99
TMEM260-211ENST00000556648 ZNF806P0C7X5 589 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 ZNF35P13682 527 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 PRF1P14222 555 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 ACKR3P25106 362 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 THBS4P35443 961 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 MAGEA5P43359 124 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 H2BFSP57053 126 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 RAB35Q15286 201 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 C3AR1Q16581 482 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 ATPAF1Q5TC12 328 aaPredicted RBP8.85□□□□□ -0.99
TMEM260-211ENST00000556648 TMEM164Q5U3C3 297 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 RAB12Q6IQ22 244 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 PIP4P2Q8N4L2 257 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 SGK3Q96BR1 496 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 WNT5BQ9H1J7 359 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 GPR35Q9HC97 309 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 GPR173Q9NS66 373 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 VSIG4Q9Y279 399 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 OR14I1A6ND48 311 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 TPOP07202 933 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 MELTFP08582 738 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 CST2P09228 141 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 CASRP41180 1078 aa8.85□□□□□ -0.99
TMEM260-211ENST00000556648 ZNF81P51508 661 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms