RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 CXCL2P19875 107 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 PMCHP20382 165 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 MST1P26927 711 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 CD1CP29017 333 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 OPRD1P41143 372 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 CNN1P51911 297 aaKnown RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 POLR2HP52434 150 aaKnown RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 WNT3P56703 355 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 S100A10P60903 97 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 SLC35A1P78382 337 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 GABRA6Q16445 453 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 TMEM183BQ1AE95 376 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 CD300EQ496F6 205 aaPredicted RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 ZNF385BQ569K4 471 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 CT45A2Q5DJT8 189 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 UTF1Q5T230 341 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 C19orf48Q6RUI8 117 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 APOOLQ6UXV4 268 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 ERASQ7Z444 233 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 YAF2Q8IY57 180 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 PELI3Q8N2H9 469 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 AMER3Q8N944 861 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 POC1AQ8NBT0 407 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 RNF149Q8NC42 400 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 HJURPQ8NCD3 748 aaPredicted RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 GPR26Q8NDV2 337 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 CADM4Q8NFZ8 388 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 OR5AN1Q8NGI8 311 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 OR56B4Q8NH76 319 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 OR13C6PQ8NH95 151 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 SPRYD4Q8WW59 207 aaPredicted RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 ASB10Q8WXI3 467 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 LHX4Q969G2 390 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 TMEM106AQ96A25 262 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 DIRAS2Q96HU8 199 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 SNX22Q96L94 193 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 ZNF582Q96NG8 517 aaPredicted RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 CIB3Q96Q77 187 aaPredicted RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 RAB40CQ96S21 281 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 TBX5Q99593 518 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 SOSTQ9BQB4 213 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 RSPO3Q9BXY4 272 aaPredicted RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 SPATC1LQ9H0A9 340 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 SPANXB1Q9NS25 103 aaPredicted RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 TAS2R8Q9NYW2 309 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 SLC25A10Q9UBX3 287 aaPredicted RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 LPAR3Q9UBY5 353 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 FTSJ1Q9UET6 329 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 PRSS50Q9UI38 385 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 ERG28Q9UKR5 140 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 MCTS1Q9ULC4 181 aaKnown RBP5.49□□□□□ -1.53
TDP1-215ENST00000556498 SIGLEC9Q9Y336 463 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 WDR45Q9Y484 360 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 PPIAL4AQ9Y536 164 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 RAI2Q9Y5P3 530 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 SNX10Q9Y5X0 201 aa5.49□□□□□ -1.53
TDP1-215ENST00000556498 TNS3Q68CZ2 1445 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.48□□□□□ -1.53
TDP1-215ENST00000556498 MARF1Q9Y4F3 1742 aaKnown RBP5.48□□□□□ -1.53
TDP1-215ENST00000556498 A0A087WWC5 75 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 LOC102723996A0A087X1L8 192 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 A0A0J9YY10 115 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 A0A1B0GX78 115 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 A0A1W2PPM1 405 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 GAGE12BA1L429 117 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 ZNF878C9JN71 531 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 RNASET2O00584 256 aaKnown RBP5.48□□□□□ -1.53
TDP1-215ENST00000556498 DEGS1O15121 323 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 TOXO94900 526 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 VENTXO95231 258 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 FTLP02792 175 aaPredicted RBP5.48□□□□□ -1.53
TDP1-215ENST00000556498 SEMG1P04279 462 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 ALDOBP05062 364 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 CTSLP07711 333 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 SOD3P08294 240 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 LIPCP11150 499 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 PSG2P11465 335 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 PGAM2P15259 253 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 ADCYAP1P18509 176 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 GADD45AP24522 165 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 SHC1P29353 583 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 MIPP30301 263 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 ELK3P41970 407 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 RPS10P46783 165 aaKnown RBP5.48□□□□□ -1.53
TDP1-215ENST00000556498 DNASE1L1P49184 302 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 GNG4P50150 75 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 F2RL1P55085 397 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 LGALS4P56470 323 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 LINC00310P59036 64 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 PPIAP62937 165 aaKnown RBP5.48□□□□□ -1.53
TDP1-215ENST00000556498 HIST1H3AP68431 136 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 SRSF2Q01130 221 aaKnown RBP5.48□□□□□ -1.53
TDP1-215ENST00000556498 HHEXQ03014 270 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 ST3GAL3Q11203 375 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 MFAP5Q13361 173 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 ELAVL3Q14576 367 aaKnown RBP5.48□□□□□ -1.53
TDP1-215ENST00000556498 ZNF345Q14585 488 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 GNMTQ14749 295 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 CDO1Q16878 200 aa5.48□□□□□ -1.53
TDP1-215ENST00000556498 ZNF750Q32MQ0 723 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms