RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 RAB2BQ8WUD1 216 aa8.25□□□□□ -1.09
ACTN1-215ENST00000555616 ISOC1Q96CN7 298 aa8.25□□□□□ -1.09
ACTN1-215ENST00000555616 ZNF799Q96GE5 643 aa8.25□□□□□ -1.09
ACTN1-215ENST00000555616 OPALINQ96PE5 141 aa8.25□□□□□ -1.09
ACTN1-215ENST00000555616 DCLRE1CQ96SD1 692 aaKnown RBP8.25□□□□□ -1.09
ACTN1-215ENST00000555616 VRK1Q99986 396 aaPredicted RBP8.25□□□□□ -1.09
ACTN1-215ENST00000555616 MRPL37Q9BZE1 423 aaKnown RBP8.25□□□□□ -1.09
ACTN1-215ENST00000555616 COMMD4Q9H0A8 199 aa8.25□□□□□ -1.09
ACTN1-215ENST00000555616 RAB1BQ9H0U4 201 aa8.25□□□□□ -1.09
ACTN1-215ENST00000555616 DYNLRB1Q9NP97 96 aa8.25□□□□□ -1.09
ACTN1-215ENST00000555616 GTF2A1LQ9UNN4 478 aa8.25□□□□□ -1.09
ACTN1-215ENST00000555616 JMJD1CQ15652 2540 aa8.25□□□□□ -1.09
ACTN1-215ENST00000555616 TRBV2A0A0J9YWF9 115 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 PNMA8CA0A1B0GUJ8 204 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 LOC390937A0A1W2PQ73 354 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 C5orf49A4QMS7 147 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 TMEM212A6NML5 194 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 INAFM1C9JVW0 142 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 E9PI62 339 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 M0R233 179 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 CCRL2O00421 344 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 OGG1O15527 345 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 CD5LO43866 347 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 LALBAP00709 142 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 ANXA2P07355 339 aaKnown RBP8.24□□□□□ -1.09
ACTN1-215ENST00000555616 ERCC1P07992 297 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-215ENST00000555616 CPEP16870 476 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 PSMA1P25786 263 aaKnown RBP8.24□□□□□ -1.09
ACTN1-215ENST00000555616 APEX1P27695 318 aaKnown RBP8.24□□□□□ -1.09
ACTN1-215ENST00000555616 PCSK6P29122 969 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 RGS6P49758 472 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 PDLIM4P50479 330 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 CCR9P51686 369 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 ZNF121P58317 390 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-215ENST00000555616 ALKBH1Q13686 389 aaKnown RBP8.24□□□□□ -1.09
ACTN1-215ENST00000555616 CDK5R1Q15078 307 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 TRAM1Q15629 374 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 TSTQ16762 297 aaKnown RBP8.24□□□□□ -1.09
ACTN1-215ENST00000555616 TMEM249Q2WGJ8 235 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 TIMM50Q3ZCQ8 353 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 LIPKQ5VXJ0 399 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 UNQ6126/PRO20091Q6UXV3 157 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 ANKRD13BQ86YJ7 626 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 CPEB3Q8NE35 698 aaKnown RBP8.24□□□□□ -1.09
ACTN1-215ENST00000555616 OR52H1Q8NGJ2 320 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 OR2G2Q8NGZ5 317 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 NEU4Q8WWR8 484 aaPredicted RBP8.24□□□□□ -1.09
ACTN1-215ENST00000555616 SMIM19Q96E16 107 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 YIPF6Q96EC8 236 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 PIMREGQ9BSJ6 248 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 CDH20Q9HBT6 801 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 NDUFB11Q9NX14 153 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 PTTG2Q9NZH5 202 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 EIF3KQ9UBQ5 218 aaKnown RBP8.24□□□□□ -1.09
ACTN1-215ENST00000555616 ENPP5Q9UJA9 477 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 OR52A1Q9UKL2 312 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 GRIP1Q9Y3R0 1128 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 SONP18583 2426 aaKnown RBP8.24□□□□□ -1.09
ACTN1-215ENST00000555616 ARFGEF3Q5TH69 2177 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 CR1P17927 2039 aa8.24□□□□□ -1.09
ACTN1-215ENST00000555616 IGLV3-9A0A075B6K5 115 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 H3BMQ9 156 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 PLPP2O43688 288 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 ICMTO60725 284 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 SRSF10O75494 262 aaKnown RBP8.23□□□□□ -1.09
ACTN1-215ENST00000555616 GABARAPO95166 117 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 LCATP04180 440 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 CD1AP06126 327 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 DBHP09172 617 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 ACSM4P0C7M7 580 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 FAM157BP0CG42 384 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 UBCP0CG48 685 aaKnown RBP8.23□□□□□ -1.09
ACTN1-215ENST00000555616 CCL2P13500 99 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 CD36P16671 472 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 USF1P22415 310 aaPredicted RBP8.23□□□□□ -1.09
ACTN1-215ENST00000555616 CCNOP22674 350 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 GIFP27352 417 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 GABRA5P31644 462 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 NR4A2P43354 598 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 SLC3A1Q07837 685 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 MFGE8Q08431 387 aaPredicted RBP8.23□□□□□ -1.09
ACTN1-215ENST00000555616 KRTAP27-1Q3LI81 207 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 DMKNQ6E0U4 476 aaPredicted RBP8.23□□□□□ -1.09
ACTN1-215ENST00000555616 FAM57BQ71RH2 274 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 CATSPERDQ86XM0 798 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 PHC2Q8IXK0 858 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 MS4A15Q8N5U1 240 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 ZNF676Q8N7Q3 588 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 ZFP41Q8N8Y5 198 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 OR5AK2Q8NH90 309 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 RPS4Y2Q8TD47 263 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 SLC7A6Q92536 515 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 THRSPQ92748 146 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 C12orf43Q96C57 262 aaKnown RBP8.23□□□□□ -1.09
ACTN1-215ENST00000555616 PGAM5Q96HS1 289 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 POM121L2Q96KW2 1035 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 C4orf45Q96LM5 186 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 SYT3Q9BQG1 590 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 FUNDC2Q9BWH2 189 aa8.23□□□□□ -1.09
ACTN1-215ENST00000555616 PBOV1Q9GZY1 135 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms