RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 NRASP01111 189 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 HRASP01112 189 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 KRASP01116 189 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 CTSGP08311 255 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 SLC35G6P0C7Q6 338 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 TNNI1P19237 187 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 GBX2P52951 348 aaPredicted RBP0.83□□□□□ -2.28
SNX6-204ENST00000555541 FOXA1P55317 472 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 ZNF121P58317 390 aaPredicted RBP0.83□□□□□ -2.28
SNX6-204ENST00000555541 LIPEQ05469 1076 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 CHIT1Q13231 466 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 RNASEKQ6P5S7 137 aaKnown RBP0.83□□□□□ -2.28
SNX6-204ENST00000555541 TMEM107Q6UX40 140 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 PAGE2Q7Z2X7 111 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 CMC1Q7Z7K0 106 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 CMTM1Q8IZ96 169 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 UBAC2Q8NBM4 344 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 ZNF420Q8TAQ5 688 aaPredicted RBP0.83□□□□□ -2.28
SNX6-204ENST00000555541 DCAKDQ8WVC6 231 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 YIPF5Q969M3 257 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 RERGQ96A58 199 aaPredicted RBP0.83□□□□□ -2.28
SNX6-204ENST00000555541 ECHDC3Q96DC8 303 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 VSIRQ9H7M9 311 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 RETNQ9HD89 108 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 SLC2A8Q9NY64 477 aa0.83□□□□□ -2.28
SNX6-204ENST00000555541 SSH2Q76I76 1423 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 ISPDA4D126 451 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 IZUMO1RA6ND01 250 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 FGFR1OPO95684 399 aaKnown RBP0.82□□□□□ -2.28
SNX6-204ENST00000555541 HPRT1P00492 218 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 IGKV1-39P01597 117 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 IGKV1D-39P04432 117 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 CSNK2A2P19784 350 aaPredicted RBP0.82□□□□□ -2.28
SNX6-204ENST00000555541 PRPHP41219 470 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 FMODQ06828 376 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 NAB1Q13506 487 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 ZNF829Q3KNS6 432 aaPredicted RBP0.82□□□□□ -2.28
SNX6-204ENST00000555541 PRAMEF5Q5TYX0 476 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 PRAMEF6Q5VXH4 476 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 TMPRSS11AQ6ZMR5 421 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 Q6ZSR6 202 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 FA2HQ7L5A8 372 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 ZCCHC7Q8N3Z6 543 aaKnown RBP0.82□□□□□ -2.28
SNX6-204ENST00000555541 EIF1ADQ8N9N8 165 aaKnown RBP0.82□□□□□ -2.28
SNX6-204ENST00000555541 CDS1Q92903 461 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 MS4A8Q9BY19 250 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 INIPQ9NRY2 104 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 RGS18Q9NS28 235 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 HYPKQ9NX55 129 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 SLC39A1Q9NY26 324 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 MTCH1Q9NZJ7 389 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 PISDQ9UG56 409 aa0.82□□□□□ -2.28
SNX6-204ENST00000555541 CCL15-CCL14A0A0B4J2E2 113 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 A0A1W2PNM2 257 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 SMCO2A6NFE2 343 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 SIRPB1O00241 398 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 THRAP10827 490 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 ZNF24P17028 368 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 PFN2P35080 140 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 C2orf54Q08AI8 447 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 TRAM2Q15035 370 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 TSC22D1Q15714 1073 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 CCL15Q16663 113 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 GCSAMLQ5JQS6 135 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 BPIFCQ8NFQ6 507 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 OR8K3Q8NH51 312 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 CAPSLQ8WWF8 208 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 ZNF606Q8WXB4 792 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 NT5C3BQ969T7 300 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 S100PBPQ96BU1 408 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 ZBTB18Q99592 522 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 PIGUQ9H490 435 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 LRRC40Q9H9A6 602 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 CHTOPQ9Y3Y2 248 aaKnown RBP0.81□□□□□ -2.28
SNX6-204ENST00000555541 C2orf16Q68DN1 1984 aa0.81□□□□□ -2.28
SNX6-204ENST00000555541 H3BQ85 93 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 NDUFAB1O14561 156 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 CDS2O95674 445 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 IGHMP01871 453 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 OR5AC1P0C628 307 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 PGA4P0DJD7 388 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 PGA3P0DJD8 388 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 PGA5P0DJD9 388 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 USF1P22415 310 aaPredicted RBP0.8□□□□□ -2.28
SNX6-204ENST00000555541 OR1E1P30953 314 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 ZNF83P51522 516 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 MFSD14CQ5VZR4 134 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 REEP3Q6NUK4 255 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 NBPF5PQ86XG9 351 aaPredicted RBP0.8□□□□□ -2.28
SNX6-204ENST00000555541 UBE2J2Q8N2K1 259 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 ZFP62Q8NB50 900 aaPredicted RBP0.8□□□□□ -2.28
SNX6-204ENST00000555541 OR4M2Q8NGB6 313 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 OR4D6Q8NGJ1 314 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 TBC1D31Q96DN5 1066 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 RAB22AQ9UL26 194 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 MED13Q9UHV7 2174 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 TENM3Q9P273 2699 aa0.8□□□□□ -2.28
SNX6-204ENST00000555541 GABRPO00591 440 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 CLOCKO15516 846 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 FARS2O95363 451 aaKnown RBP0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms