RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 GTF2F2P13984 249 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 CSNK2A2P19784 350 aaPredicted RBP2.37□□□□□ -2.03
PRPF39-206ENST00000554429 PAX6P26367 422 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 TTPAP49638 278 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 TNFSF10P50591 281 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 NR0B1P51843 470 aaKnown RBP2.37□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF134P52741 427 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 TCL1AP56279 114 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 CTXN1P60606 82 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 PLA2G7Q13093 441 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 SURF2Q15527 256 aaPredicted RBP2.37□□□□□ -2.03
PRPF39-206ENST00000554429 ATP6V1FQ16864 119 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 RNF212Q495C1 297 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 PDZD11Q5EBL8 140 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 TIMM23BQ5SRD1 257 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 OTUD3Q5T2D3 398 aaPredicted RBP2.37□□□□□ -2.03
PRPF39-206ENST00000554429 SAMD13Q5VXD3 122 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 FAHD1Q6P587 224 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 DHRS4L2Q6PKH6 230 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 XKRXQ6PP77 449 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 PLET1Q6UQ28 207 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 NAPRTQ6XQN6 538 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 Q6ZS46 218 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 GRINAQ7Z429 371 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 MAVSQ7Z434 540 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 WDR53Q7Z5U6 358 aaPredicted RBP2.37□□□□□ -2.03
PRPF39-206ENST00000554429 TRIM48Q8IWZ4 208 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 ADGRF3Q8IZF5 1079 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 LGI4Q8N135 537 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 GALNT16Q8N428 558 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 SLC38A9Q8NBW4 561 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 OR51D1Q8NGF3 324 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 OR5AK3PQ8NH89 298 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 IL17DQ8TAD2 202 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 ABHD4Q8TB40 342 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 ITLN2Q8WWU7 325 aaPredicted RBP2.37□□□□□ -2.03
PRPF39-206ENST00000554429 ASB17Q8WXJ9 295 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 DCUN1D1Q96GG9 259 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 ITCHQ96J02 903 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 SORCS2Q96PQ0 1159 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 MBOAT4Q96T53 435 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 EPYCQ99645 322 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 RAB11FIP5Q9BXF6 653 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 FAM234AQ9H0X4 552 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 CCDC167Q9P0B6 97 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 TMEM216Q9P0N5 145 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 OR14J1Q9UGF5 321 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF391Q9UJN7 358 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 VPREB3Q9UKI3 123 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 RAB26Q9ULW5 256 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 POMPQ9Y244 141 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 NTNG1Q9Y2I2 539 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 TMED7Q9Y3B3 224 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 UGT2A1Q9Y4X1 527 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 PDZD2O15018 2839 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 ICE1Q9Y2F5 2266 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 hCG_1818297A0A087WSY0 165 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 A0A0X1KG70 313 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 BTNL10A8MVZ5 291 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 LEUTXA8MZ59 168 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 USP17L23D6RBM5 183 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 E7EQ34 232 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 MS4A18H0YCH9 400 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 I3L521 148 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 ACOT8O14734 319 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 SLC16A5O15375 505 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 XRCC3O43542 346 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 SPRY2O43597 315 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 MPZL2O60487 215 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 WNT2P09544 360 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 VPREB1P12018 145 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 MGMTP16455 207 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 KDELR1P24390 212 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 PSMA1P25786 263 aaKnown RBP2.37□□□□□ -2.03
PRPF39-206ENST00000554429 FOLR3P41439 243 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 CA7P43166 264 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 BDKRB1P46663 353 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 SOX2P48431 317 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 CAV2P51636 162 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 GPR143P51810 404 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 RAB2AP61019 212 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 DCDP81605 110 aaKnown RBP2.37□□□□□ -2.03
PRPF39-206ENST00000554429 ROM1Q03395 351 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 CRMP1Q14194 572 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 KIR2DS3Q14952 304 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 MAD2L1BPQ15013 274 aaPredicted RBP2.37□□□□□ -2.03
PRPF39-206ENST00000554429 CYP1B1Q16678 543 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 CYP51A1Q16850 503 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 GPR33Q49SQ1 333 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 PRR30Q53SZ7 412 aaPredicted RBP2.37□□□□□ -2.03
PRPF39-206ENST00000554429 ARL13AQ5H913 290 aaPredicted RBP2.37□□□□□ -2.03
PRPF39-206ENST00000554429 TFDP3Q5H9I0 405 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 FGD3Q5JSP0 725 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 NCMAPQ5T1S8 102 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 OR2G6Q5TZ20 316 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 LYPLAL1Q5VWZ2 237 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 SP5Q6BEB4 398 aaPredicted RBP2.37□□□□□ -2.03
PRPF39-206ENST00000554429 TYW3Q6IPR3 259 aaKnown RBP2.37□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF585AQ6P3V2 769 aa2.37□□□□□ -2.03
PRPF39-206ENST00000554429 COX15Q7KZN9 410 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms